Query= MSMg01no266_d20.b1 MSMg01no266_d20.b1 CHROMAT_FILE:
MSMg01no266_d20.b1 PHD_FILE: MSMg01no266_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:58 2005
(315 letters)
>mm_chr1_92477917_92478630
Length = 714
Score = 551 bits (285), Expect = e-161
Identities = 304/311 (97%), Gaps = 3/311 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttgagtg-taccccacaggctcagctccttctctggctctctttgctgacacc 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 512 ggaattcttgagtgaaaacccacaggctcagctccttctctggctctctttgctgacatc 453
Query: 63 agtggggtctctttgcccttgatcttttctagaagcattccgaggttcatacattaactc 122
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 452 agtggggtctctttgcccttgatcttttctagaagcattccaaggttcatacattaactc 393
Query: 123 cttagctactttgccccctcactttcatttttttttttcagattttcctttccttcatat 182
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 392 cttagctactttgccccctcactttca--tttttttttcagattttcctttccttcatat 335
Query: 183 tcatgacacttggggtcaagggaagcggtattagaatttacagtcatgtgttgccgtagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcatgacacttggggtcaagggaagcggtattagaatttacagtcatgtgttgccgtagc 275
Query: 243 tttcctctttgtgttcagccccagctgctgagttcttgctactgattcgcattcctaaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tttcctctttgtgttcagccccagctgctgagttcttgctactgattcgcattcctaaac 215
Query: 303 cacccccgccc 313
|||||||||||
Sbjct: 214 cacccccgccc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_d20.g1 MSMg01no266_d20.g1 CHROMAT_FILE:
MSMg01no266_d20.g1 PHD_FILE: MSMg01no266_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:58 2005
(330 letters)
>mm_chr1_92349454_92350183
Length = 730
Score = 607 bits (314), Expect = e-178
Identities = 326/330 (98%)
Strand = Plus / Plus
Query: 1 tttcatgaatgtagtcttttaaaaaggatacaaccacataaaaatgaaaataaaagcatc 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 201 tttcatgaatgtagtcttttaaaaaggatagaaagacataaaaatgaaaataaaagcatc 260
Query: 61 tacaaggcacaaagttcaacaggttgcttctacaaaggctgccgtgatgttctttatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaaggcacaaagttcaacaggttgcttctacaaaggctgccgtgatgttctttatatt 320
Query: 121 ttattagactttgcctgtggcctttaacagtctataagaatgtattctttatggatccat 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ttattagactttgcctgtggcctttaacagtctgtaagaatgtattctttatggatccat 380
Query: 181 agtactccacattatgatgtattgtgacttacttggccattttcctgctatcaggtattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtactccacattatgatgtattgtgacttacttggccattttcctgctatcaggtattt 440
Query: 241 atggttttggttttgttgttgttttgttttgttttacttttctcattgttaaagacacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggttttggttttgttgttgttttgttttgttttacttttctcattgttaaagacacag 500
Query: 301 acgttggacatttttgcacaaaaacctcag 330
||||||||||||||||||||||||||||||
Sbjct: 501 acgttggacatttttgcacaaaaacctcag 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
