CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGAACATTGACGCCAAAAAGAGTCCACGCTTTATGCATAAAGTTC
ATGTCACTGACATTGGGACCCATCTATGATTAGTGCTGTTTCTGAGATCT
TTGCTTGACAGTGCTCTATAAATCTGTAACAAGGCAGTGTCTACATTACC
ACCTAGGAAAGGAGCTGTGCTCAGTGCAGTTATAAACTGGATGGGACCTA
AAAGACCAACTCAAAGAAGAGAAACCTGGCAAAATTTTTCCAAAATCTAT
TTCAGCTTCATTGTTGCATTTGTATTTACAGCCAACTGTATACAACAGCC
AACTGTATATACTTTTGTATGAGCTCTCACCCATAGTTTAAAGTTTAAGT
TTTACGTAGAAGTGGATTCTCAGGTCACAACTGCAATGAAAAGAAACCAT
TCTGGCTACTAGATTCAAGGACCCTGAGCCAGAATGAAAACAATTTCTTT
TTTTGGAGAAAATTTTGCTATGAATAGAACTACCAGACAAAATTTCAAAT
AAAGTAAAAAATAATGAACTACATTCTATATTTTTTAAAGTTTATTGTGA
TTTTTATTGTAATTTAATAAATAAAATTTATTTATTGGGATTAAAAAATG
GAAGAATTCATTGTGTATCACAGCACAATGATCATGAAGACAAGTTGAGA
AGGCTTGGTCCAGAGTTCTCTGAGATN

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATATGAACAATAGCTGTGTCATAT
CTAGAAGATAGAACTTTATGCCTCTCTTCCCTAGTTGGATCTTATATTCT
TTCCCTTGCAGGGGTTGGGGGTGAAGGTGACACAGATGTCCCATCTATGG
CTGAGGACTGAAAACCTCCTTGCAGCATTGCAACTCTGTACTTGGTTGCT
TAAATGAATGTGGAGCTTGAGAAAAAGACAACAGTTACTCCTGAAAGAAT
AAAAAACAAAACTTAATTAAAAATCAATAAGCCTGAGTTGTTTCTAATGG
GCTCACTCTTTTGCTATTTGTATTTCCCTGCACCCTTCCTTGAGAGCATC
ACATGCCTACACATAGGATGGCCATCAAGCCACAAATTCTCCCCAAAACA
CACTGGCTCCAATTCTAGACTATTACTTGTTATGAATTGCAGTGGTTTTA
CTTTAACTATAGAAATTTCTGCTATTATAGAAAAATAATTGTTTAATTGT
GGAAAGCAAAGACTTAATATTTTGCTACCCAAGGTCACACAAAAATTTCT
CAGGCACAAAAAAAAAAAGTGTTATACATACAAAAGGTCTAANATGCCCT
GGTCTAACTCAGAGAAATGAGATAAGGACTACATTTTTCCTACCGAATAA
GTTAGGACTTGATCTCAGATTTAAAAAGA

Query= MSMg01no267_c16.g1 MSMg01no267_c16.g1 CHROMAT_FILE:
MSMg01no267_c16.g1 PHD_FILE: MSMg01no267_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:09 2005
         (546 letters)



>mm_chr1_185615188_185616132
          Length = 945

 Score = 1004 bits (519), Expect = 0.0
 Identities = 540/547 (98%), Gaps = 2/547 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatgaacaatagctgtgtcatatctagaagatagaactttatgcctctcttccctagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atatgaacaatagctgtgtcatatctagaagatagaactttatgcctctcttccctagtt 495

                                                                       
Query: 61  ggatcttatattctttcccttgcaggggttgggggtgaaggtgacacagatgtcccatct 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 494 ggatcttatattctttcccttgcaggggttgggggtgagggtgacacagatgtcccatct 435

                                                                       
Query: 121 atggctgaggactgaaaacctccttgcagcattgcaactctgtacttggttgcttaaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atggctgaggactgaaaacctccttgcagcattgcaactctgtacttggttgcttaaatg 375

                                                                       
Query: 181 aatgtggagcttgagaaaaagacaacagttactcctgaaagaataaaaaacaaaacttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aatgtggagcttgagaaaaagacaacagttactcctgaaagaataaaaaacaaaacttaa 315

                                                                       
Query: 241 ttaaaaatcaataagcctgagttgtttctaatgggctcactcttttgctatttgtatttc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||
Sbjct: 314 ttaaaaatcaataagcctgagttgtttctaatgggctcactcttttgctatgcg-atttc 256

                                                                       
Query: 301 cctgcacccttccttgagagcatcacatgcctacacataggatggccatcaagccacaaa 360
           |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cctgtagccttccttgagagcatcacatgcctacacataggatggccatcaagccacaaa 196

                                                                       
Query: 361 ttctccccaaaacacactggctccaattctagactattacttgttatgaattgcagtggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttctccccaaaacacactggctccaattctagactattacttgttatgaattgcagtggt 136

                                                                       
Query: 421 tttactttaactatagaaatttctgctattatagaaaaataattgtttaattgtggaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tttactttaactatagaaatttctgctattatagaaaaataattgtttaattgtggaaag 76

                                                                       
Query: 481 caaagacttaatattttgctacccaaggtcacacaaaaatttctcaggcac-aaaaaaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 75  caaagacttaatattttgctacccaaggtcacacaaaaatttctcaggcacaaaaaaaaa 16

                  
Query: 540 aaagtgt 546
           |||||||
Sbjct: 15  aaagtgt 9


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 945
Length adjustment: 10
Effective length of query: 536
Effective length of database: 935
Effective search space:   501160
Effective search space used:   501160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)