Query= MSMg01no267_g22.b1 MSMg01no267_g22.b1 CHROMAT_FILE:
MSMg01no267_g22.b1 PHD_FILE: MSMg01no267_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:30 2005
(315 letters)
>mm_chr1_91054663_91055370
Length = 708
Score = 543 bits (281), Expect = e-159
Identities = 301/311 (96%), Gaps = 7/311 (2%)
Strand = Plus / Minus
Query: 5 gaattcttagacctctatgtctgtgaacgtttttgtagatgtctaaatgtttatcattgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaattcttagacctctatgtctgtgaacgtttttgtagatgtctaaatgtttatcattgt 449
Query: 65 gttgaaagtctggtgggataaaaactccattactttgtgtcaatgtgattggatagtcaa 124
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 448 gttgaaagtctggtgggataaaaactccattattttgtgtc----tgattggatagtcaa 393
Query: 125 tgtgtctatccaatgtggtgagtgtctagcgtggatgagaccttccattactgtctctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgtgtctatccaatgtggtgagtgtctagcgtggatgagaccttccattactgtctctga 333
Query: 185 atgcctggtcagatgagacctccatcagtgtgcggcttgtctggtgctgaccagacttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atgcctggtcagatgagacctccatcagtgtgcggcttgtctggtgctgaccagacttca 273
Query: 245 gtcattgtttgtctggcgagtaagaccaaccattgtgtgctctgtggagtgtggtgccca 304
| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gacattgtttg---gtcgagtaagaccaaccattgtgtgctctgtggagtgtggtgccca 216
Query: 305 gaccttcaatc 315
|||||||||||
Sbjct: 215 gaccttcaatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 708
Length adjustment: 9
Effective length of query: 306
Effective length of database: 699
Effective search space: 213894
Effective search space used: 213894
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_g22.g1 MSMg01no267_g22.g1 CHROMAT_FILE:
MSMg01no267_g22.g1 PHD_FILE: MSMg01no267_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:30 2005
(289 letters)
>mm_chr1_90927977_90928665
Length = 689
Score = 497 bits (257), Expect = e-145
Identities = 281/289 (97%)
Strand = Plus / Plus
Query: 1 gactcgctaatgtcatatgcttgacaggagactaagaaacatgctttatttccctgaagc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gactcgctaatgtcgtatgcttgacaggagactaagaaacatgctttatttccctgaagc 260
Query: 61 tgaacaattgcactatcctcactgagagctccggtgcacaggacgtgggagcctgtaatc 120
||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 261 tgaacaattgcaccatcctcactgagagctccggtgcacagggcgtgggcgcctgtaatc 320
Query: 121 tccatagcctctcatcagccagcacgcagcagaattgctagccttctctctgttcctgaa 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccgtagcctctcatcagccagcacgcagcagaattgctagccttctctctgttcctgaa 380
Query: 181 gctgaaagctggctgggtggtgtggctgctagtcgttattcaccctgcatctcaatcagg 240
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gttgaaagctggctgggtggtgtggctgctagtcgttactcaccctgcatctcaatcagg 440
Query: 241 tctctgttgctgtgataaaacaccagggccatttacaggttgcagggag 289
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctctgttgctatgataaaacaccagggccatttacaggttgcagggag 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
