Query= MSMg01no267_p23.b1 MSMg01no267_p23.b1 CHROMAT_FILE:
MSMg01no267_p23.b1 PHD_FILE: MSMg01no267_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:12 2005
(323 letters)
>mm_chr1_144009556_144010278
Length = 723
Score = 607 bits (314), Expect = e-178
Identities = 317/318 (99%)
Strand = Plus / Plus
Query: 5 gaattccattagataatgcggcattattgctcttctttcatgaaaactgacagcctagtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattagataatgcggcattattgctcttctttcatgaaaactgacagcctagtc 264
Query: 65 tatctgtcctacaagctttataatagtgaaataaatcagtttcatatttcaaaatattaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatctgtcctacaagctttataatagtgaaataaatcagtttcatatttcaaaatattaa 324
Query: 125 atcttcactagtttattggactaattttaagaaacaaccattaaacatccaaaactcacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcttcactagtttattggactaattttaagaaacaaccattaaacatccaaaactcacc 384
Query: 185 agtattgtaacaaacatttcatatgctatgtattagatgcagcattttagcaaattcttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtattgtaacaaacatttcatatgctatgtattagatgcagcattttagcaaattcttc 444
Query: 245 aatgaccatgatatacttttttccattgtgtgtataggtgttttttttttctgtaatgtg 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatgaccatgatatatttttttccattgtgtgtataggtgttttttttttctgtaatgtg 504
Query: 305 aaaaacacttttaaaata 322
||||||||||||||||||
Sbjct: 505 aaaaacacttttaaaata 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_p23.g1 MSMg01no267_p23.g1 CHROMAT_FILE:
MSMg01no267_p23.g1 PHD_FILE: MSMg01no267_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:12 2005
(291 letters)
>mm_chr1_144140416_144141105
Length = 690
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 tgaaaacagcaaaaaattttttaacaacaatataaaagaaaaatatctcaaactttctgc 60
|||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 490 tgaaaacagc-aaaaatcttttaacaacaatataaaagaaaaatatctcagactttctgc 432
Query: 61 cttttaagtgtttccaaaagaaaaaccatccatttctattgaaagaaaatttactcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cttttaagtgtttccaaaagaaaaaccatccatttctattgaaagaaaatttactcagtg 372
Query: 121 agaattagaaagggtgaactatttccttgcttccctttcttcaaatcatagtaaaatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agaattagaaagggtgaactatttccttgcttccctttcttcaaatcatagtaaaatctt 312
Query: 181 caggtaaaaattagattttgagttaatgacagatataaaaaatgaatgatagtgaatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caggtaaaaattagattttgagttaatgacagatataaaaaatgaatgatagtgaatcca 252
Query: 241 aaagctcttataaaagtctgacatcatctagtattgggtcagtgaggaaaa 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aaagctcttataaaagtctgacatcatctagtattgggtcagtgaggaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
