Query= MSMg01no268_a02.b1 MSMg01no268_a02.b1 CHROMAT_FILE:
MSMg01no268_a02.b1 PHD_FILE: MSMg01no268_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:12 2005
(647 letters)
>mm_chr1_31275193_31276239
Length = 1047
Score = 1108 bits (573), Expect = 0.0
Identities = 594/601 (98%)
Strand = Plus / Plus
Query: 47 agaagtggccctgtagttaggagtcaagatggtgggaaatgtgttcctcaagaataagag 106
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 247 agaagtggccctgtagttaggagtcaagatggtgggaaacgtgttcctcgagaataagag 306
Query: 107 cgttgcaggagagaagaaatggaatgttggttattctgcaaatgtttccatttttcaatt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cgttgcaggagagaagaaatggaatgttggttattctgcaaatgtttccatttttcaatt 366
Query: 167 aggacaaatattcttcctggccacagagagttgttcagtctcatcaacttcagttaaaac 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aggacaaatattcttcctggccacagagagttgttcagtctcatcaacttcagttaaaac 426
Query: 227 aggacttggaatgtggcctcaggaagggagaattttggaatattttaccaaccttgaagc 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aggacttggaatgtggcctcaggaagggagaattttggaatattttaccaaccttgaagc 486
Query: 287 attttagaaagatgttgccttcctatgctatattactgacatcccatctctgtagggcaa 346
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 487 attttagaaagatgttgccttcctatgctatgttactgacatcccatctctgtagggcaa 546
Query: 347 gctcatactgattgcagtctgttatatggacaggaaattataaggatgagttttgatttt 406
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 547 gctcatactgattgcagtctgttatacggacaggaaattataaggatgagttttgatttt 606
Query: 407 aaagcagtttacgtaggagataatgaagtgattaggcttttcagactggagatgaaggct 466
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aaagcactttacgtaggagataatgaagtgattaggcttttcagactggagatgaaggct 666
Query: 467 ttgagtatacggaatcaactgcctctctgtgatcaaagggccgactttatcatgctttta 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttgagtatacggaatcaactgcctctctgtgatcaaagggccgactttatcatgctttta 726
Query: 527 ttttaagaatatatatgaccctagaggtactcttgtctcactcagaagtgagtgattggc 586
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 727 ttttaagaatatatatgaccctagaggtactcttgtctcactcagaactgagtgattggc 786
Query: 587 aaacctaaaactctcttagatctgctaattcctagttcattctttaaaaaaaaatcaata 646
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 787 aaacctaaaactctcttagatctgctaattcctagttcattcttaaaaaaaaaatcaata 846
Query: 647 t 647
|
Sbjct: 847 t 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_a02.g1 MSMg01no268_a02.g1 CHROMAT_FILE:
MSMg01no268_a02.g1 PHD_FILE: MSMg01no268_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:12 2005
(616 letters)
>mm_chr1_31430242_31431256
Length = 1015
Score = 986 bits (510), Expect = 0.0
Identities = 552/566 (97%), Gaps = 3/566 (0%)
Strand = Plus / Minus
Query: 1 actccgcataacaagctggcctcagagatctgtgtgccactcaca-tgctggaattaaag 59
|||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 564 actccgcataacaagctggcctcagagatctgcgtgccactca-agtgctggaattaaag 506
Query: 60 gtgctcaccacgacacctagtccttagtcagactaattaaagtgagaagacaaacactaa 119
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgctcaccataacacctagtccttggtcagactaattaaagtgagaagacaaacactaa 446
Query: 120 atgtgggtatcaccttttagtcgcatccctggcaaaaggaatactgaggggaaagttcct 179
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 445 atgtgggtatcaccttttagtcgcat-cctggcataaggaatactgaggggaaagttcct 387
Query: 180 agttttgtctgcttgtcttcgcatcttgctggtatgctcatcaaccctgttgctggctct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agttttgtctgcttgtcttcgcatcttgctggtatgctcatcaaccctgttgctggctct 327
Query: 240 gtctttgctttagtccctgatgcttgatattccactaacactgaatccttgtttcatcag 299
|||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||
Sbjct: 326 gtctttgctttagtccctcatgcttgatattccactaacactgaatccccgcttcatcag 267
Query: 300 ccttacaacacaccctgaagattcatggctctccaagaatcttcaaggtcttcaggattc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccttacaacacaccctgaagattcatggctctccaagaatcttcaaggtcttcaggattc 207
Query: 360 ctgagaattctgaggcatccagcctcatgggctgagctgtaactgggttttcacatctcc 419
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 206 ctgagaattctgaggcatccagcctcatgggctgaactgtaactgggttttcacatctcc 147
Query: 420 agtgtgctgataactattattggactatctagaccctgctgtctaagcctatgtaagaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 146 agtgtgctgataactattattggactatctagaccctgctgtctaagcctacgtaagaaa 87
Query: 480 tcctcctttgaattcatattccttctatcatttacaattctctaaaaatatttaaaaggg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tcctcctttgaattcatattccttctatcatttacaattctctaaaaatatttaaaaggg 27
Query: 540 acaaattggcacaaaacttcctccag 565
||||||||||||||||||||||||||
Sbjct: 26 acaaattggcacaaaacttcctccag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1015
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1005
Effective search space: 609030
Effective search space used: 609030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
