Query= MSMg01no268_k23.b1 MSMg01no268_k23.b1 CHROMAT_FILE:
MSMg01no268_k23.b1 PHD_FILE: MSMg01no268_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:00 2005
(327 letters)
>mm_chr1_22972799_22973525
Length = 727
Score = 586 bits (303), Expect = e-172
Identities = 318/323 (98%)
Strand = Plus / Plus
Query: 5 gaattctcagttcctcctgtgccatgcctacctggatgctgccatgtccgtgccttggtg 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 205 gaattctcagttcctcctgtgccatgcctacctggatgctgccatgttcgtgccttgatg 264
Query: 65 ataatggtctgaacctctgaacctctaagcctgtcccaattaaatgctttcttaagactt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataatggtctgaacctctgaacctctaagcctgtcccaattaaatgctttcttaagactt 324
Query: 125 gccctgatcatggtgtctgttcacagcagtaaaaccctaactaagacaccaacaaaaact 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 gccctgatcatggtgtctgttcacaccagtaaaaccctaactaagacaccaacaaaaact 384
Query: 185 gttattcttagtaaaagaaggaaaatgtgtataattgtcaggtagcaatattcatcacat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttattcttagtaaaagaaggaaaatgtgtataattgtcaggtagcaatattcatcacat 444
Query: 245 taggaaaaggcatccagcacatacctatatattccctaaactgaatacagaaatattgct 304
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 tagaaaaaggcatccagcacatacctatatattccctaatctgaatacagaaatattgct 504
Query: 305 gttctcttcaatatatgtcttga 327
|||||||||||||||||||||||
Sbjct: 505 gttctcttcaatatatgtcttga 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_k23.g1 MSMg01no268_k23.g1 CHROMAT_FILE:
MSMg01no268_k23.g1 PHD_FILE: MSMg01no268_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:01 2005
(293 letters)
>mm_chr1_23157694_23158385
Length = 692
Score = 545 bits (282), Expect = e-160
Identities = 291/294 (98%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 1 ccaggaactatgggagtggtaaaaatcaacatgggacaagtttaggaagacagacaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ccaggaactatgggagtggtaaaaatcaacatgggacaagtttaggaagacagacaacac 433
Query: 61 aacagagctgtagcatcttggagaagcaaactaacacttgggctagtgatttcattatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aacagagctgtagcatcttggagaagcaaactaacacttgggctagtgatttcattatca 373
Query: 121 tgcattgccacctagctctcaaacccct-tcagctattccttatctatataatgctagag 179
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 372 tgcattgccacctagctctcaaa-ccctctcagctattccttatctatataatgctagag 314
Query: 180 gtcaatgcagcaaggtagcactgtctgctactgctcataccttttaacacagcacgttat 239
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 313 gtcaatgcagcaaggtagcactgtctgctactgctcatacc-tttaacacagcacgttat 255
Query: 240 ttcagtttcttttccttccttacatgttcttctttctttcctcatacaccatat 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttcagtttcttttccttccttacatgttcttctttctttcctcatacaccatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
