XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCAAAAGATAAAACACAAATGGCAGAAACACTTACAGAAATGTTCAGCAT
CCTTGGGGTGCTGATATGCCAATTAAAATGAAATCAGATTAATTAAATGA
AAATCAAATCAAATTAAACAAAATCAGGGGAGGGCAAATTAAAACTACTT
TGAAACTTCATCAGAATGGCCAAGAAAAATAAGACTAGTGATAGCACATG
CTGGCAAGAGTGCAGGGGAGAGGGGGCACTATTCACTCGTAGTAGGAATG
CGAACTGGTACAACCATTATAAAAATCAATGTGGTTGTCCCCAAGGAAGT
TGCAAAGAGATATTTCTCAAAACCCAGCTATACCACTCTTGGGAACATAC
ACAAAGGATTCTATATCCTATTACAGAGATACTTGTTCATATATTTTCAT
TGCTGCTCTATTTATAATAGTCAGAAAGTGGAAATAGCCTAGATGTCTAC
CAATTAATGATTGGGTAATGAAAATGTACACACACACACACGCACACACA
CACACATATATATATATATATGTATATATATATATATATACATATATAAT
GAAATATTATTCAGCATTTAAGAAAATAAAATTGTGGAAATTGAATAAAT
ATTGATAGAACTAGAGAAAAGTCATTTCAATTGAGATAACCCAGACCCTA
AAAAGCCAAAGATTGTATCTTTTCTCTCATATAAG

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCTCCTTTGCATAACAGGATCAGAACATTGGT
CTGTTTTGGAAAAGCATAGATTTCTCACATACAAAAATTTGCATAAAATA
GTTAAATAGTTTCATGTAAAAGTCACTTTGGGGAGAGAGTCCTTTATGCC
ATCCTCTCCTAATCCAAAGTTCTTAAGACTAAGTCAAATTTTCAACAGAC
AAGTTCTTATGGACTAGACTATACTTCCTTTCTTGAATGTGTTCTAACAC
TGGTTTTTGGAGGGTTTTGTTCGTTTGTTTGTTTTACAAAACTATTGTTT
TATTTACATCTCCTTTTGACACACGCTATTCCAAATGACCTAGTGTTTAA
CTTCTGTGTTTGCCTTTGATTTGGTGAAACCCATTTTCAAACTTTTGAGG
GAATCACCATCCCTGACCTCAAGCTGTACTACAGAGCAATAGTGAAAAAA
AAAAACGAACAAACAAACAAAACAAAACAACAACAACAACAAAAAACCTG
CCTGGTATTGGTACAGTGACAGGTAGGAAGATCAATAGAATAGAATTGAA
GACCCAGGGATGAACCCATATACCTATGATCACTTGATCTTTGACAAAGG
AGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCT
GGCTCAACAGGAGGTCAGCATGTAGAANAATGGAAACTGAACCATTCTCA
TC

Query= MSMg01no270_f19.g1 MSMg01no270_f19.g1 CHROMAT_FILE:
MSMg01no270_f19.g1 PHD_FILE: MSMg01no270_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:59 2005
         (684 letters)



>mm_chr1_82126734_82127817
          Length = 1084

 Score = 1180 bits (610), Expect = 0.0
 Identities = 668/693 (96%), Gaps = 12/693 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctcctttgcataacaggatcagaacattggtctgttttggaaaagcatagatttctcac 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tctcctttgcataataggatcagaacattggtctgttttggaaaagcatagatttctcac 253

                                                                       
Query: 61  atacaaaaatttgcataaaatagttaaatagtttcatgtaaaagtcactttggggagaga 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 254 atacaaaaatttgcataaaatagttaaatagtt-catgtaaaagtcactttggggagaga 312

                                                                       
Query: 121 gtcctttatgccatcctctcctaatccaaagttcttaagactaagtcaaattttcaacag 180
           ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 313 gtcctttatgccatcctctcctaattcaaagttcttaagactaagccaaattttcaacag 372

                                                                       
Query: 181 acaagttcttatggactagactatacttcctttcttgaatgtgttctaacactggttttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acaagttcttatggactagactatacttcctttcttgaatgtgttctaacactggttttt 432

                                                                       
Query: 241 ggagggttttgttcgtttgtttgttt--------tacaaaactattgttttatttacatc 292
           ||||||||||||| ||||||||||||        ||||||||||||||||||||||||||
Sbjct: 433 ggagggttttgtttgtttgtttgtttgtttgttttacaaaactattgttttatttacatc 492

                                                                       
Query: 293 tccttttgacacacgctattccaaatgacctagtgtttaacttctgtgtttgcctttgat 352
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tccttttgacacgcgctattccaaatgacctagtgtttaacttctgtgtttgcctttgat 552

                                                                       
Query: 353 ttggtgaaacccattttcaaacttttgagggaatcaccatccctgacctcaagctgtact 412
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 553 ttggtgaaacccattttcaaacttctgagggaatcaccatccctgacctcaagctgtact 612

                                                                       
Query: 413 acagagcaatagtgaaaaaaaaa-aacgaacaaacaaacaaaacaaaacaacaacaacaa 471
           |||||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||
Sbjct: 613 acagagcaatagtgaaaacaaaacaa--aacaaacaaacaaaacaaaacaacaacaacaa 670

                                                                       
Query: 472 caaaaaacctgcctggtattggtacagtgacaggtaggaagatcaatagaatagaattga 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 caaaaaacctgcctggtattggtacagtgacaggtaggaagatcaatagaatagaattga 730

                                                                       
Query: 532 agacccagggatgaacccatatacctatgatcacttgatctttgacaaaggagctaaaac 591
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 agacccagagatgaacccatatacctatgatcacttgatctttgacaaaggagctaaaac 790

                                                                       
Query: 592 catccagtggaaaaaagacagcattttcaacaaatggtgctggctcaacaggaggtcagc 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 catccagtggaaaaaagacagcattttcaacaaatggtgctggctcaacaggaggtcagc 850

                                            
Query: 652 atgtagaanaatggaaactgaaccattctcatc 684
           |||||||| |||| ||||  |||||| ||||||
Sbjct: 851 atgtagaaaaatgcaaaccaaaccatcctcatc 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space:   723876
Effective search space used:   723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)