Query= MSMg01no270_p10.b1 MSMg01no270_p10.b1 CHROMAT_FILE:
MSMg01no270_p10.b1 PHD_FILE: MSMg01no270_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:45 2005
(688 letters)
>mm_chr1_84842546_84843633
Length = 1088
Score = 1309 bits (677), Expect = 0.0
Identities = 683/685 (99%)
Strand = Plus / Minus
Query: 4 ggaattctgaagtgaggatggaggagcctctctttgtgactgagctattacatggcaaag 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 888 ggaattctgaagtgaggatggaggagcctctctctgtgactgagctattacatggcaaag 829
Query: 64 cactgaacacttactttcgagagtttaatcactttggttggaccatgtcatctttctcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 cactgaacacttactttcgagagtttaatcactttggttggaccatgtcatctttctcct 769
Query: 124 caaagtgcctatgccacttaaaggaatgtaaaatttctgattaaaagccatttcacaact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 caaagtgcctatgccacttaaaggaatgtaaaatttctgattaaaagccatttcacaact 709
Query: 184 ctaatgaggtacatcctggagtgtcacagggttgggaaccatttttctaaagtgtgtcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ctaatgaggtacatcctggagtgtcacagggttgggaaccatttttctaaagtgtgtcag 649
Query: 244 acatgaggaacagaagaataatgcagtttattattataaacacctgacccaacctgtggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 acatgaggaacagaagaataatgcagtttattattataaacacctgacccaacctgtggg 589
Query: 304 gtaggaatgggtgcgtttattgcagctgttggtgtcagaaaagcaggtgaagatgtgaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gtaggaatgggtgcgtttattgcagctgttggtgtcagaaaagcaggtgaagatgtgaag 529
Query: 364 gacttcagtaggtaaaattaacatggactccatgaaggatggagtagcgccaggctcact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gacttcagtaggtaaaattaacatggactccatgaaggatggagtagcgccaggctcact 469
Query: 424 gttctcagtcatagggaaaaaggggaaagggctaagagggtcagacaaaaagcagagagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gttctcagtcatagggaaaaaggggaaagggctaagagggtcagacaaaaagcagagagg 409
Query: 484 aggctgggcaaattacaggcagcaaggcagaggacaagagagcacagcttgactttgtac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aggctgggcaaattacaggcagcaaggcagaggacaagagagcacagcttgactttgtac 349
Query: 544 agtagtttgcaggggtggagggaacactggggctgtggctggtaagacagtgggtaaaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agtagtttgcaggggtggagggaacactggggctgtggctggtaagacagtgggtaaaat 289
Query: 604 ggatatgatactggagctagggcataagcaggcttcccatggggatatgggaaaaaggag 663
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggctatgatactggagctagggcataagcaggcttcccatggggatatgggaaaaaggag 229
Query: 664 gcagaaacagcagctatgcttcctt 688
|||||||||||||||||||||||||
Sbjct: 228 gcagaaacagcagctatgcttcctt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_p10.g1 MSMg01no270_p10.g1 CHROMAT_FILE:
MSMg01no270_p10.g1 PHD_FILE: MSMg01no270_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:45 2005
(651 letters)
>mm_chr1_84759835_84760885
Length = 1051
Score = 1205 bits (623), Expect = 0.0
Identities = 642/651 (98%), Gaps = 6/651 (0%)
Strand = Plus / Plus
Query: 1 tagatacaacaagcaatctgccaaaccaccctgaaatatagaaaactgttttaaagtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagatacaacaagcaatctgccaaaccaccctgaaatatagaaaactgttttaaagtgga 260
Query: 61 gaaaataatatcctttataaaaagcaactactaaaatgtctagcacagtacttcagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaataatatcctttataaaaagcaactactaaaatgtctagcacagtacttcagagca 320
Query: 121 gcatgtgcatcttacagagctacagtcaaggaattagcacaatgtagttcaacaataaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatgtgcatcttacagagctacagtcaaggaattagcacaatgtagttcaacaataaag 380
Query: 181 aaaacacaccttaagccaggcagtgatggcgcacacctttaatcccagaacttgagaggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 aaaacacaccttaagccaggcagtgatggcgcacacctttaatcccagaatttgagaggc 440
Query: 241 agaagcaggcggatcactgagtttgaggacagtctggtctatatagagtgagttccaaga 300
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 441 agaagcaggcggatcactgagtttgaggacagcctggtctatagagagtgagttccaaga 500
Query: 301 cagccagggctacagagaaaacaaaaaaacaaacaaacaaaaaaaaaaacaaaaacaacc 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 cagccagggctacagagaaaacaaaaaaacaaacaaa-----aaaaaaacaaaaacaacc 555
Query: 361 ccacactttatcgataacacttaccgcttgtaaaatggctttactgtgtcgccgtgacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccacactttatcgataacacttaccgcttgtaaaatggctttactgtgtcgccgtgacaa 615
Query: 421 catctccaaggcagtcaaggcctgctctgccacatcaatacactgaataacttgcaactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 catctccaaggcagtcaaggcctgctctgccacatcaatacactgaataacttgcaactg 675
Query: 481 gaaacattaaagtgggtatcaaaggttattatttacaataccttatttgtatgaacactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaaacattaaagtgggtatcaaaggttattatttacaataccttatttgtatgaacactg 735
Query: 541 tacttcctctacttgtagtcatttacatgacgccaacatgcaaccaaccaaactagaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tacttcctctacttgtagtcatttacatgacgccaacatgcaaccaaccaaactagaaaa 795
Query: 601 cagccacccttgaatgacactatataagcatagctgacagtttcctcctaa 651
|||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 796 cagccacccttgaatgacactata-aagcatagctgacagtttcctcctaa 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
