MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-273C07
Chromosome	1 (Build37)
Map Location	132,712,120 - 132,860,808
singlet/doublet	doublet
Overlap gene	Pigr, Faim3, Il24, Il20, Il19
Upstream gene	Thsd7b, Daf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr
Downstream gene	Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik, Avpr1b, LOC667238, Ctse, 5430435G22Rik, Slc26a9, 4732466D17Rik, Slc41a1, Rab7l1, Nucks1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Thsd7b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210417 MGI:2443925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Daf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13137 MGI:104849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13136 MGI:104850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zp3r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22789 MGI:104965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C4bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12269 MGI:88229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C4bp-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12270 MGI:99594
definition	gene_synonym : C4BPB note : complement component 4 binding protein, pseudogene 1 pseudo : _no_value

name	Pfkfb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18640 MGI:107815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Yod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226418 MGI:2442596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AA986860 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212439 MGI:2138143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fcamr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64435 MGI:1927803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pigr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18703 MGI:103080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Faim3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69169 MGI:1916419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93672 MGI:2135548
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58181 MGI:1890473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329244 MGI:1890472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16153 MGI:96537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mapkapk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17164 MGI:109298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dyrk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226419 MGI:1330300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lgtn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16865 MGI:109342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rassf5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54354 MGI:1926375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ikbke (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56489 MGI:1929612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srgap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14270 MGI:109605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042826 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100042821 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042821
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	2700049P18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108900 MGI:1919669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Avpr1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26361 MGI:1347010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 15 Proteins pseudo : _no_value

name	Ctse (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13034 MGI:107361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5430435G22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226421 MGI:2442295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc26a9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320718 MGI:2444594
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4732466D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212933 MGI:2442939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc41a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98396 MGI:2444823
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab7l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226422 MGI:2385107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nucks1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98415 MGI:1934811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thsd7b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254218 GeneID:210417 MGI:2443925
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thrombospondin, type I, domain containing 7B transcript_id : NM_172485.2

name	Daf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118026912 GeneID:13137 MGI:104849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : decay accelerating factor 2 transcript_id : NM_007827.2

name	Cd55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326521 GeneID:13136 MGI:104850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD55 antigen transcript_id : NM_010016.2

name	Zp3r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677654 GeneID:22789 MGI:104965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zona pellucida 3 receptor transcript_id : NM_009581.1

name	C4bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115430100 GeneID:12269 MGI:88229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 4 binding protein transcript_id : NM_007576.3

name	Pfkfb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87116671 GeneID:18640 MGI:107815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 2 transcript_id : NM_008825.3

name	Yod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352842 GeneID:226418 MGI:2442596
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae) transcript_id : NM_178691.3

name	AA986860 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341131 GeneID:212439 MGI:2138143
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AA986860 transcript_id : NM_177604.2

name	Fcamr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450630 GeneID:64435 MGI:1927803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fc receptor, IgA, IgM, high affinity transcript_id : NM_144960.1

name	Pigr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981569 GeneID:18703 MGI:103080
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymeric immunoglobulin receptor transcript_id : NM_011082.2

name	Faim3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802450 GeneID:69169 MGI:1916419
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fas apoptotic inhibitory molecule 3 transcript_id : NM_026976.2

name	Il24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716386 GeneID:93672 MGI:2135548
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 24 transcript_id : NM_053095.1

name	Il20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946715 GeneID:58181 MGI:1890473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 20 transcript_id : NM_021380.1

name	Il19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57977320 GeneID:329244 MGI:1890472
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 19 transcript_id : NM_001009940.1

name	Il10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754317 GeneID:16153 MGI:96537
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 10 transcript_id : NM_010548.1

name	Mapkapk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45544579 GeneID:17164 MGI:109298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAP kinase-activated protein kinase 2 transcript_id : NM_008551.1

name	Dyrk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130152 GeneID:226419 MGI:1330300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 transcript_id : NM_145508.2

name	Lgtn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350503 GeneID:16865 MGI:109342
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ligatin transcript_id : NM_010709.2

name	Rassf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803301 GeneID:54354 MGI:1926375
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras association (RalGDS/AF-6) domain family 5 transcript_id : NM_018750.3

name	Ikbke (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379783 GeneID:56489 MGI:1929612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibitor of kappaB kinase epsilon transcript_id : NM_019777.3

name	Srgap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486599 GeneID:14270 MGI:109605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT-ROBO Rho GTPase activating protein 2 transcript_id : NM_001081011.1

name	LOC100042826 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234302 GeneID:100042826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : similar to pORF1 transcript_id : XM_001479399.1

name	2700049P18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341750 GeneID:108900 MGI:1919669
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700049P18 gene transcript_id : NM_175382.2

name	Avpr1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61675709 GeneID:26361 MGI:1347010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine vasopressin receptor 1B transcript_id : NM_011924.2

name	Ctse (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982440 GeneID:13034 MGI:107361
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin E transcript_id : NM_007799.2

name	5430435G22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031992 GeneID:226421 MGI:2442295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5430435G22 gene transcript_id : NM_145509.2

name	Slc26a9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802673 GeneID:320718 MGI:2444594
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26, member 9 transcript_id : NM_177243.3

name	4732466D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375855 GeneID:212933 MGI:2442939
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4732466D17 gene transcript_id : NM_178079.2

name	Slc41a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67514554 GeneID:98396 MGI:2444823
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 41, member 1 transcript_id : NM_173865.2

name	Rab7l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450114 GeneID:226422 MGI:2385107
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB7, member RAS oncogene family-like 1 transcript_id : NM_144875.1

name	Nucks1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341542 GeneID:98415 MGI:1934811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear casein kinase and cyclin-dependent kinase substrate 1 transcript_id : NM_175294.2

name	Thsd7b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254219 CCDS:CCDS15255.1 GeneID:210417 MGI:2443925
definition	codon_start : 1 product : thrombospondin, type I, domain containing 7B protein_id : NP_766073.2

name	Daf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118026913 GeneID:13137 MGI:104849
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 note : complement-transmembrane product : decay accelerating factor 2 protein_id : NP_031853.2

name	Cd55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326522 CCDS:CCDS15256.1 GeneID:13136 MGI:104850
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA] GO_process : GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 note : complement-glycosylphosphatidylinositol; GPI anchor addition signal; glycosylphoshatidylinositol-anchored form; Cromer blood group product : decay accelerating factor 1 protein_id : NP_034146.2

name	Zp3r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677655 CCDS:CCDS15257.1 GeneID:22789 MGI:104965
definition	GO_component : GO:0043159 - acrosomal matrix [Evidence IDA]; GO:0001669 - acrosome [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence ISS] GO_process : GO:0007340 - acrosome reaction [Evidence ISS]; GO:0007339 - binding of sperm to zona pellucida [Evidence IDA]; GO:0007338 - fertilization (sensu Metazoa) [Evidence IDA] codon_start : 1 exception : mismatches in translation function : specifically binds ZP3 product : zona pellucida 3 receptor protein_id : NP_033607.1

name	C4bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115430101 GeneID:12269 MGI:88229
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 product : complement component 4 binding protein protein_id : NP_031602.3

name	Pfkfb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147045 GeneID:18640 MGI:107815
definition	GO_function : GO:0003873 - 6-phosphofructo-2-kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004331 - fructose-2,6-bisphosphate 2-phosphatase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006003 - fructose 2,6-bisphosphate metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : PFK-2/FBPase-2 gene B product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 2 protein_id : NP_032851.2

name	Yod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520089 GeneID:226418 MGI:2442596
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : HIV-induced protein-7-like protease protein_id : NP_848806.1

name	AA986860 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243972 GeneID:212439 MGI:2138143
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC212439 protein_id : NP_808272.1

name	Fcamr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450631 CCDS:CCDS15259.1 GeneID:64435 MGI:1927803
definition	GO_function : GO:0005515 - protein binding [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IDA] GO_process : GO:0006955 - immune response [Evidence TAS] codon_start : 1 exception : mismatches in translation note : Fca/m receptor product : Fc receptor, IgA, IgM, high affinity protein_id : NP_659209.1

name	Pigr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981570 CCDS:CCDS15260.1 GeneID:18703 MGI:103080
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : phosphatidylinositol glycan, class R product : polymeric immunoglobulin receptor protein_id : NP_035212.2

name	Faim3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62460639 CCDS:CCDS15261.1 GeneID:69169 MGI:1916419
definition	codon_start : 1 note : regulator of Fas-induced apoptosis product : Fas apoptotic inhibitory molecule protein_id : NP_081252.1

name	Il24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716387 CCDS:CCDS15262.1 GeneID:93672 MGI:2135548
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence ISS] codon_start : 1 exception : mismatches in translation product : interleukin 24 protein_id : NP_444325.1

name	Il20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946716 CCDS:CCDS15263.1 GeneID:58181 MGI:1890473
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence ISS] [Evidence IEA]; GO:0045517 - interleukin-20 receptor binding [Evidence IDA] GO_process : GO:0030097 - hemopoiesis [Evidence NAS]; GO:0006955 - immune response [Evidence IEA]; GO:0045606 - positive regulation of epidermal cell differentiation [Evidence ISS]; GO:0045618 - positive regulation of keratinocyte differentiation [Evidence ISS]; GO:0042517 - positive regulation of tyrosine phosphorylation of Stat3 protein [Evidence ISS]; GO:0050727 - regulation of inflammatory response [Evidence ISS]; GO:0007262 - STAT protein nuclear translocation [Evidence ISS] codon_start : 1 note : four helix bundle cytokine 10 product : interleukin 20 protein_id : NP_067355.1

name	Il19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57977321 CCDS:CCDS15264.1 GeneID:329244 MGI:1890472
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0042226 - interleukin-6 biosynthesis [Evidence IDA]; GO:0006800 - oxygen and reactive oxygen species metabolism [Evidence IDA] codon_start : 1 product : interleukin 19 protein_id : NP_001009940.1

name	Il10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754318 CCDS:CCDS15265.1 GeneID:16153 MGI:96537
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] [Evidence ISS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence IDA]; GO:0005141 - interleukin-10 receptor binding [Evidence ISS] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0030183 - B cell differentiation [Evidence ISS]; GO:0042100 - B cell proliferation [Evidence ISS]; GO:0007253 - cytoplasmic sequestering of NF-kappaB [Evidence ISS]; GO:0042742 - defense response to bacterium [Evidence IDA]; GO:0030097 - hemopoiesis [Evidence ISS]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence ISS]; GO:0045077 - negative regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0045347 - negative regulation of MHC class II biosynthesis [Evidence ISS]; GO:0045019 - negative regulation of nitric oxide biosynthesis [Evidence ISS]; GO:0042130 - negative regulation of T cell proliferation [Evidence ISS]; GO:0045348 - positive regulation of MHC class II biosynthesis [Evidence IDA]; GO:0045191 - regulation of isotype switching [Evidence ISS]; GO:0042092 - T-helper 2 type immune response [Evidence ISS] codon_start : 1 note : cytokine synthesis inhibitory factor product : interleukin 10 protein_id : NP_034678.1

name	Mapkapk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45544580 CCDS:CCDS15266.1 GeneID:17164 MGI:109298
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0048255 - mRNA stabilization [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : MAPKAP kinase 2 product : MAP kinase-activated protein kinase 2 protein_id : NP_032577.1

name	Dyrk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704000 CCDS:CCDS15267.1 GeneID:226419 MGI:1330300
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein_id : NP_663483.1

name	Lgtn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859574 GeneID:16865 MGI:109342
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006413 - translational initiation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ligatin protein_id : NP_034839.1

name	Rassf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60097929 CCDS:CCDS15268.1 GeneID:54354 MGI:1926375
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Rap1-binding protein; novel ras effector 1 product : Ras association (RalGDS/AF-6) domain family 5 protein_id : NP_061220.2

name	Ikbke (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981053 CCDS:CCDS15269.1 GeneID:56489 MGI:1929612
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008384 - IkappaB kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : inducible IKappaB kinase; inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon product : inhibitor of kappaB kinase epsilon protein_id : NP_062751.2

name	Srgap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486600 GeneID:14270 MGI:109605
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : formin binding protein 2 product : SLIT-ROBO Rho GTPase activating protein 2 protein_id : NP_001074480.1

name	LOC100042826 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234303 GeneID:100042826
definition	codon_start : 1 product : similar to pORF1 protein_id : XP_001479449.1

name	2700049P18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425090 CCDS:CCDS15270.1 GeneID:108900 MGI:1919669
definition	codon_start : 1 product : hypothetical protein LOC108900 protein_id : NP_780591.1

name	Avpr1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753152 GeneID:26361 MGI:1347010
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : V3/V1b pituitary vasopressin receptor; arginine vasopressin type 1b receptor product : arginine vasopressin receptor 1B protein_id : NP_036054.1

name	Ctse (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681081 CCDS:CCDS15271.1 GeneID:13034 MGI:107361
definition	GO_component : GO:0005768 - endosome [Evidence IDA]; GO:0019028 - viral capsid [Evidence IEA]; GO:0019031 - viral envelope [Evidence IEA] GO_function : GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0004193 - cathepsin E activity [Evidence IEA] [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008130 - neutrophil collagenase activity [Evidence IEA]; GO:0004194 - pepsin A activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0019886 - antigen processing and presentation of exogenous peptide antigen via MHC class II [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cathepsin E preproprotein protein_id : NP_031825.1

name	5430435G22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704002 CCDS:CCDS15272.1 GeneID:226421 MGI:2442295
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC226421 protein_id : NP_663484.1

name	Slc26a9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893301 CCDS:CCDS15273.1 GeneID:320718 MGI:2444594
definition	GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : SLC26A9 anion transporter/exchanger; anion transporter/exchanger-9 product : solute carrier family 26, member 9 protein_id : NP_796217.1

name	4732466D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374119 CCDS:CCDS15274.1 GeneID:212933 MGI:2442939
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC212933 protein_id : NP_835180.1

name	Slc41a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238870 CCDS:CCDS15275.1 GeneID:98396 MGI:2444823
definition	GO_function : GO:0008324 - cation transporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA] codon_start : 1 product : solute carrier family 41, member 1 protein_id : NP_776290.1

name	Rab7l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450115 CCDS:CCDS15276.1 GeneID:226422 MGI:2385107
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAB7, member RAS oncogene family-like 1 protein_id : NP_659124.1

name	Nucks1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424964 GeneID:98415 MGI:1934811
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy product : nuclear, casein kinase and cyclin-dependent kinase substrate protein_id : NP_780503.1

name	LOC100042821 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042821
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:180091
definition	standard_name : AW552990

name	(CDS detail)
type	STS
link
xref	UniSTS:207202
definition	standard_name : C87253

name	(CDS detail)
type	STS
link
xref	UniSTS:178457
definition	standard_name : AI323748

name	(CDS detail)
type	STS
link
xref	UniSTS:207204
definition	standard_name : BB285655

name	(CDS detail)
type	STS
link
xref	UniSTS:207202
definition	standard_name : C87253

name	(CDS detail)
type	STS
link
xref	UniSTS:225316
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178457
definition	standard_name : AI323748

name	(CDS detail)
type	STS
link
xref	UniSTS:128643
definition	standard_name : D1Mit29

name	(CDS detail)
type	STS
link
xref	UniSTS:124634
definition	standard_name : 46.MMHAP81FRH10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124634
definition	standard_name : 46.MMHAP81FRH10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:178460
definition	standard_name : AV264399

name	(CDS detail)
type	STS
link
xref	UniSTS:124733
definition	standard_name : D17861

name	(CDS detail)
type	STS
link
xref	UniSTS:158847
definition	standard_name : AI195242

name	(CDS detail)
type	STS
link
xref	UniSTS:167264
definition	standard_name : RH126698

name	(CDS detail)
type	STS
link
xref	UniSTS:124050
definition	standard_name : 33.MMHAP72FLC6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:163260
definition	standard_name : X98847

name	(CDS detail)
type	STS
link
xref	UniSTS:165097
definition	standard_name : AA986860

name	(CDS detail)
type	STS
link
xref	UniSTS:207203
definition	standard_name : BB445490

name	(CDS detail)
type	STS
link
xref	UniSTS:144179
definition	standard_name : Pigr

name	(CDS detail)
type	STS
link
xref	UniSTS:273350
definition	standard_name : PMC55698P1

name	(CDS detail)
type	STS
link
xref	UniSTS:178458
definition	standard_name : AB001489

name	(CDS detail)
type	STS
link
xref	UniSTS:128704
definition	standard_name : D1Mit345

name	(CDS detail)
type	STS
link
xref	UniSTS:273626
definition	standard_name : PMC96371P1

name	(CDS detail)
type	STS
link
xref	UniSTS:273123
definition	standard_name : PMC321611P1

name	(CDS detail)
type	STS
link
xref	UniSTS:178459
definition	standard_name : M37897

name	(CDS detail)
type	STS
link
xref	UniSTS:223116
definition	standard_name : RH141120

name	(CDS detail)
type	STS
link
xref	UniSTS:158846
definition	standard_name : AA960234

name	(CDS detail)
type	STS
link
xref	UniSTS:167283
definition	standard_name : D1Ertd5e

name	(CDS detail)
type	STS
link
xref	UniSTS:178462
definition	standard_name : AU042887

name	(CDS detail)
type	STS
link
xref	UniSTS:239150
definition	standard_name : Nore1-pending

name	(CDS detail)
type	STS
link
xref	UniSTS:128531
definition	standard_name : D1Mit193

name	(CDS detail)
type	STS
link
xref	UniSTS:178461
definition	standard_name : AW558201

name	(CDS detail)
type	STS
link
xref	UniSTS:213306
definition	standard_name : RH130018

name	(CDS detail)
type	STS
link
xref	UniSTS:165098
definition	standard_name : AI448945

name	(CDS detail)
type	STS
link
xref	UniSTS:207205
definition	standard_name : BB210543

name	(CDS detail)
type	STS
link
xref	UniSTS:163261
definition	standard_name : X97399

name	(CDS detail)
type	STS
link
xref	UniSTS:158848
definition	standard_name : AI098026

name	(CDS detail)
type	STS
link
xref	UniSTS:234209
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:164127
definition	standard_name : AI573938

name	(CDS detail)
type	STS
link
xref	UniSTS:212946
definition	standard_name : RH129649

name	(CDS detail)
type	STS
link
xref	UniSTS:158850
definition	standard_name : 35.MMHAP31FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:178463
definition	standard_name : AI647518

name	(CDS detail)
type	STS
link
xref	UniSTS:6910
definition	standard_name : D1S2379

name	(CDS detail)
type	STS
link
xref	UniSTS:163069
definition	standard_name : RH126361

name	(CDS detail)
type	STS
link
xref	UniSTS:128865
definition	standard_name : D1Mit497

name	LOC667238 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234304 GeneID:667238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 15 Proteins product : similar to adaptor-related protein complex 1, sigma 3 subunit pseudo : _no_value transcript_id : XR_034191.1

clone name	MSMg01-498G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060I15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-324J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-301C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368E06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-525D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-309B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-273C07.T7 (MSMg01no273_c07.b1)	MSMg01-273C07.TJ (MSMg01no273_c07.g1)
ACC	AG412227	AG412228
length	728	730
length of high quality (start - end)	316 (43 - 358)	287 (72 - 358)
definition	CHROMAT_FILE: MSMg01no273_c07.b1 PHD_FILE: MSMg01no273_c07.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:12:27 2005	CHROMAT_FILE: MSMg01no273_c07.g1 PHD_FILE: MSMg01no273_c07.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:12:28 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(132,712,120 - 132,712,431)	(132,860,522 - 132,860,808)
sequence	ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT TCTGTCTTATAACAGTATCTGTTGGGGAACCTCCATCTTTTCAGCAATCA CAAGTGGTATTTTCTTTACCCGATATGCTAGCAAGTGCTCTGTATTCTGT ACTTGAGCAGTGCAGGCATTGAGCACCATAAGCTGTGGGGGAAGAAAAGT CCCAACACCAATTTAAGAACTGTCACACTGACGTTACCAGAAGGCCCAGT CTTGCCTTCTAAGCTGTCAGTGGCATTAAAGTCCTTCAGAAATACCTATT CACACCTATGTCCCCAGACTCTGTACCAAGAAAGCCAAAGGAAATATCCA CCGTCCTGATGTTTTTTCCTGCCCCCCCCCAGTAGGCAGATTGAATGCAT CTAGCCAGGGGGAAACACAAATCTTTGGATGCTTAAACTAGAACAGTAGT TCTCAACCCTTGGGTCGGGACCCCTTTGGGCGGGGTGTCAAATGATCCTT TCCCAAGGGTTGTAAATCAGATACTCTGCATATCAGATATTCATATTATG ATTATAGCAGAAGCAAAATTATGGTTATGAAGTGGCAACAAAAATAATTT TATGGTTGGTAGTCACCCCAACATGAGGAACTGTATTAAAGAGTCACAGC ATTAGGGAGGTTGAGAACCACCGTGTTAGAGGGACTCTGAGGCCTGGTGG AAGCAGTCACTTGTTATAAGTCACTCAG	TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTCTCCGAAGCTTTCCTCACTGGAAGCTCC TCCAGCCTACTATAGTCACCCCCCACTCGGTGGCTTTGACCTTGGCTCCT TAGCTGCCCACTGTGCCTGGCCAGCCAGGGCCTGGCTGTTATCCACCACC GACTCTGGAGCAGCATTGACCATGGAAGAGACCCAGCAGCGTGTCTTGAT CCAACTACCCCTCCCCTTTGCATAGCACAACTCTTTGGCTGCTCTAGCCA GGCCAGAGCCCTGCAAATCTCCATGGACAGAATCTGGTACACAGACAGGC AGTTAATATTAATTGCACCCCCCCCCCCACTCACCCAGGAAACCTACTTG TAGCAGTGCTGTGACCACACTCTCAAAAGTTTGACTGAAGGAGGGACACA CACCCGAATGTGGCGAGATCCCATGGCTGAGGTCCCATTCTGGAGGAAAA TGAGAGAGTGAGTCACTCACTAGTGTCCATCTCTCTTCGGTTCCTTACTA CAGAAGGACTTGCACTGGGAACACTGTCTCGCACTCCTGCTATGTCTGCA ACTGAGGGGGACCTTGAACTCCTGATCCTCCTGCCCCCTCCCCCCCTTTT TGAGCACTGAGATTATGCGCATGAACCACCATACCTGTTTTATGTAGTTC TAGAGATTGAACTCATGCAAGCACCCCACC
quality values	Open. Hide. 6 6 6 6 15 25 39 41 37 37 37 31 19 19 9 9 9 19 19 41 47 48 36 36 33 33 34 38 39 43 39 43 43 46 46 46 48 36 36 40 42 42 42 59 68 68 47 47 47 42 47 50 68 68 68 68 68 68 57 57 48 47 47 50 50 51 57 57 57 57 57 57 57 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 50 48 48 46 46 48 68 68 68 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 57 57 57 57 57 57 59 68 68 68 68 68 57 57 52 52 52 57 59 59 68 59 59 57 57 57 57 57 68 68 68 68 68 57 57 59 59 52 57 57 62 62 68 68 68 68 68 68 68 59 59 57 68 68 68 68 57 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 57 57 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 34 32 14 14 17 30 30 43 43 42 43 44 68 68 59 59 57 57 57 59 59 48 48 57 59 57 57 57 57 57 57 57 53 50 44 44 41 41 23 23 12 16 10 9 9 10 11 9 13 12 12 12 9 8 8 8 10 10 10 14 12 13 11 11 10 11 13 18 30 34 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 50 41 39 37 20 20 11 11 11 12 12 21 28 28 28 28 28 22 22 22 24 28 37 29 41 39 48 48 57 43 43 39 37 37 37 43 43 43 43 43 43 54 59 59 57 54 54 57 57 57 57 57 48 48 48 54 54 54 57 57 57 57 57 57 59 57 57 57 59 54 54 54 26 21 9 9 9 21 28 59 59 59 59 59 59 59 44 44 31 35 35 44 35 57 57 57 57 57 59 59 34 32 14 14 14 28 34 44 26 24 11 11 16 34 44 68 57 57 57 57 59 54 59 59 59 54 57 57 59 59 59 59 54 54 54 57 57 57 57 54 57 57 57 57 57 59 59 57 57 43 43 43 43 43 48 57 47 50 50 37 39 37 43 39 25 25 12 12 18 19 24 24 41 37 31 31 35 37 37 39 40 41 43 48 48 48 48 48 48 48 48 48 40 39 39 39 37 28 28 14 14 14 28 28 41 40 40 37 37 37 30 30 30 32 28 34 28 30 33 37 40 39 39 30 37 30 39 39 39 39 43 43 39 32 32 28 28 33 37 39 41 41 34 34 28 20 18 30 28 33 37 37 37 37 31 30 18 11 11 8 9 8 8 8 13 15 26 28 22 28 32 32 27 31 35 28 28 17 15 15 16 14 24 20 15 13 8 8 10 9 10 22 24 27 28 28 23 23 23 28 17 16 11 10 9 14 23 10 9 9 9 9 14 17 30 20 22 25 20	Open. Hide. 8 8 8 8 8 15 12 18 10 9 9 17 25 32 33 37 37 37 39 50 50 59 59 37 23 23 9 9 7 8 8 8 8 8 10 11 21 21 41 39 41 41 44 33 36 36 33 33 33 37 37 34 25 18 11 9 9 9 9 9 12 18 20 16 10 9 9 22 22 33 33 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 53 53 57 57 57 57 59 59 59 59 59 50 50 50 50 50 36 53 50 50 50 41 41 39 36 22 23 11 12 10 12 12 27 27 47 47 50 50 50 50 50 50 57 59 59 59 57 53 53 53 53 53 53 59 57 57 57 57 59 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 48 57 48 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 48 57 57 32 32 31 34 37 37 30 30 31 43 43 54 50 50 57 57 59 59 59 59 59 59 59 59 59 59 57 57 57 53 53 50 59 59 59 59 29 27 11 12 12 9 6 6 6 6 6 6 10 8 8 8 8 8 11 10 12 12 15 11 8 9 9 9 9 13 16 34 36 59 59 40 48 48 48 48 57 57 57 57 57 57 59 59 59 59 59 57 48 48 48 50 50 46 31 28 12 12 10 10 10 10 10 15 18 23 19 22 18 15 12 10 9 9 9 10 23 27 41 41 41 41 41 59 43 43 43 48 57 48 48 43 43 47 59 43 43 43 57 59 57 57 57 57 59 59 59 59 54 54 54 54 54 57 57 57 59 59 59 59 59 59 43 46 43 46 46 57 59 59 59 68 68 68 59 68 68 68 59 59 48 48 57 57 57 57 57 57 57 47 57 57 59 59 57 59 57 54 54 54 59 59 68 68 59 59 57 57 59 48 47 48 59 57 57 57 57 68 68 68 59 57 57 57 48 57 57 59 59 59 59 59 48 48 48 48 48 48 57 48 48 48 48 48 50 47 59 36 36 28 26 18 28 27 37 37 34 37 37 39 35 47 47 59 57 48 48 59 59 48 57 48 48 43 43 30 30 24 14 14 30 27 41 37 37 37 37 34 34 28 24 24 34 25 29 19 19 19 30 34 39 35 37 39 41 41 41 46 40 40 48 40 41 41 59 59 43 41 32 32 39 39 39 39 39 41 41 41 41 41 41 37 37 43 43 37 37 30 30 28 34 28 24 24 21 23 20 24 15 27 12 12 11 22 24 35 37 25 24 24 24 19 19 25 17 17 17 30 29 23 12 11 11 17 19 30 30 30 19 16 12 12 12 12 23 25 24 24 20 20 20 32 32 39 28 28 15 15 11 19 18 13 10 10 12 18 10 11 9 15 15 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no273_c07.b1 MSMg01no273_c07.b1 CHROMAT_FILE:
MSMg01no273_c07.b1 PHD_FILE: MSMg01no273_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:27 2005
         (316 letters)



>mm_chr1_132711916_132712631
          Length = 716

 Score =  565 bits (292), Expect = e-165
 Identities = 307/312 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtcttataacagtatctgttggggaacctccatcttttcagcaatcacaagtg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 205 gaattctgtcttataacagtatctgttggggaacctccatcttttcagcaatcacaactg 264

                                                                       
Query: 65  gtattttctttacccgatatgctagcaagtgctctgtattctgtacttgagcagtgcagg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 gtattttctttacccgatatgctagcaagtgctctgtattctgtacttgggcagtgcagg 324

                                                                       
Query: 125 cattgagcaccataagctgtgggggaagaaaagtcccaacaccaatttaagaactgtcac 184
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattgagcaacataagctgtgggggaagaaaagtcccaacaccaatttaagaactgtcac 384

                                                                       
Query: 185 actgacgttaccagaaggcccagtcttgccttctaagctgtcagtggcattaaagtcctt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actgacgttaccagaaggcccagtcttgccttctaagctgtcagtggcattaaagtcctt 444

                                                                       
Query: 245 cagaaatacctattcacacctatgtccccagactctgtaccaagaaagccaaaggaaata 304
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 cagaaatacctattcacacctatgtccccagacactgtaccaagaaagccaaaggaaata 504

                       
Query: 305 tccaccgtcctg 316
           ||||| ||||||
Sbjct: 505 tccacggtcctg 516


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space:   217049
Effective search space used:   217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no273_c07.g1 MSMg01no273_c07.g1 CHROMAT_FILE:
MSMg01no273_c07.g1 PHD_FILE: MSMg01no273_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:28 2005
         (287 letters)



>mm_chr1_132860322_132861008
          Length = 687

 Score =  524 bits (271), Expect = e-153
 Identities = 283/287 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctccgaagctttcctcactggaagctcctccagcctactatagtcaccccccactcggt 60
           |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 487 tctccgaagctttcctcactggaagctcctccagcctactgtagtcactccccactcggt 428

                                                                       
Query: 61  ggctttgaccttggctccttagctgcccactgtgcctggccagccagggcctggctgtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggctttgaccttggctccttagctgcccactgtgcctggccagccagggcctggctgtta 368

                                                                       
Query: 121 tccaccaccgactctggagcagcattgaccatggaagagacccagcagcgtgtcttgatc 180
           |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 367 tccaccaccgactcaggagcagcatcgaccatggaagagacccagcagcgtgtcttgatc 308

                                                                       
Query: 181 caactacccctcccctttgcatagcacaactctttggctgctctagccaggccagagccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caactacccctcccctttgcatagcacaactctttggctgctctagccaggccagagccc 248

                                                          
Query: 241 tgcaaatctccatggacagaatctggtacacagacaggcagttaata 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgcaaatctccatggacagaatctggtacacagacaggcagttaata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space:   188484
Effective search space used:   188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information