Query= MSMg01no273_l14.b1 MSMg01no273_l14.b1 CHROMAT_FILE:
MSMg01no273_l14.b1 PHD_FILE: MSMg01no273_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:09 2005
(294 letters)
>mm_chr1_71587157_71587850
Length = 694
Score = 561 bits (290), Expect = e-164
Identities = 293/294 (99%)
Strand = Plus / Plus
Query: 1 caaatggatctgagtactgtctggcactctttctccagattggcttctgctgatgccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatggatctgagtactgtctggcactctttctccagattggcttctgctgatgccact 260
Query: 61 ttctaccaaaacgccctagccagtgtcaccagtgatttcgatgacaacgttgctcattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctaccaaaacgccctagccagtgtcaccagtgatttcgatgacaacgttgctcattcc 320
Query: 121 aagtcacccttcagttttcaaatgacttcaccaaaatgttaaaaatgatcgattgcactt 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtcgcccttcagttttcaaatgacttcaccaaaatgttaaaaatgatcgattgcactt 380
Query: 181 tcacacccaattattactggctttcacaatacccagctactttctcctggagctttgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcacacccaattattactggctttcacaatacccagctactttctcctggagctttgcct 440
Query: 241 taaaccttcttctcactctgcagctcctcttgcctaatcattacaatctgagag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaccttcttctcactctgcagctcctcttgcctaatcattacaatctgagag 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no273_l14.g1 MSMg01no273_l14.g1 CHROMAT_FILE:
MSMg01no273_l14.g1 PHD_FILE: MSMg01no273_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:09 2005
(295 letters)
>mm_chr1_71753141_71753832
Length = 692
Score = 528 bits (273), Expect = e-154
Identities = 284/289 (98%), Gaps = 3/289 (1%)
Strand = Plus / Minus
Query: 1 cttaaaagcatcacatctctgtgattagggtaatgaagacagctgaagaaattgattgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cttaaaagcatcacatctctgtgattagggtaatgaagacagctgaagaaattgattgtc 427
Query: 61 tcgtccctgattaagagatgacttattggatgaaaaaaagaagctctgtcgaggaaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcgtccctgattaagagatgacttattggatgaaaaaaagaagctctgtcgaggaaagag 367
Query: 121 agggtcagtcattgattctagcacccaatcaaggtgtcctaaaaacaaaataaggaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agggtcagtcattgattctagcacccaatcaaggtgtcctaaaaacaaaataaggaaaag 307
Query: 181 cagaaccactttgggtttataaataaaattctacataactttcagccacagcaaagtttg 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 306 cagaaccactttgggtttataaataaaattctacgtaactttcagccacagcaaagtttg 247
Query: 241 tgatatgttttaaattgacaattttatgatgactaaaaaaaggagaaat 289
|||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 246 tgatatgttttaaattgacaat---atgatgaataaaaaaaggagaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 692
Length adjustment: 9
Effective length of query: 286
Effective length of database: 683
Effective search space: 195338
Effective search space used: 195338
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
