Query= MSMg01no274_f07.b1 MSMg01no274_f07.b1 CHROMAT_FILE:
MSMg01no274_f07.b1 PHD_FILE: MSMg01no274_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:51 2005
(342 letters)
>mm_chr1_78268261_78269002
Length = 742
Score = 646 bits (334), Expect = 0.0
Identities = 340/342 (99%)
Strand = Plus / Plus
Query: 1 tcacctgctgttcaaatgtgtacgctcttaaaactcccaaattctgttttcttaagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacctgctgttcaaatgtgtacgctcttaaaactcccaaattctgttttcttaagaatg 260
Query: 61 aaagtcagcaatcacagtcactggcctgaaaaactccaagcaaaggcttaagaaggaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagtcagcaatcacagtcactggcctgaaaaactccaagcaaaggcttaagaaggaccc 320
Query: 121 tcagtcatcagatatggggaaaattacttcaaggccaatggagtttacatttgggtcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagtcatcagatatggggaaaattacttcaaggccaatggagtttacatttgggtcaga 380
Query: 181 agactctggtatctcttaagcaccccagattgataccattacctcgtgatccatgaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactctggtatctcttaagcaccccagattgataccattacctcgtgatccatgaaatt 440
Query: 241 gttaactcctctctgatatttttgatctagcattaaaagctgacttcactgtttcaattc 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtaactcctctctgatatttttgatctagcattaaaagctgacttcactgtttcaattc 500
Query: 301 aagagtgaatacttcaatgattaccaaaaagagaaagacact 342
||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcgtgaatacttcaatgattaccaaaaagagaaagacact 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_f07.g1 MSMg01no274_f07.g1 CHROMAT_FILE:
MSMg01no274_f07.g1 PHD_FILE: MSMg01no274_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:51 2005
(287 letters)
>mm_chr1_78409857_78410537
Length = 681
Score = 451 bits (233), Expect = e-131
Identities = 268/283 (94%), Gaps = 6/283 (2%)
Strand = Plus / Minus
Query: 1 tctatcacctggatgtgcttgttatttcctttggatttatgtgttattcaattaagcacc 60
|||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct: 477 tctatcacctggatgtgctttttatttcctttggatttatgtgaaattgaattaagcacc 418
Query: 61 tgagtctgcccatgcacggcggggtgagcagggacctccgtgcagagggtccgctgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgagtctgcccatgcacggcggggtgagcagggacctccgtgcagagggtccgctgagga 358
Query: 121 ccagagtattttgtctatgtgtttaaagggacactactgttaagagttggagagagctcg 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 357 ccagagtattttgtctatgtgtttaaaggaacactactgttaagagttggagacagctcg 298
Query: 181 tcacctccgccagtctcacgtctgaccccgaaggaagtcaacagggataaaagggacatt 240
|||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 297 tcacctccgccagtct------tgaccccgaaggaagtcaacagggataaaaggggcatt 244
Query: 241 tgcctcatcctcagagataaagcagctcgggtcccttctggaa 283
|||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 243 tgcctcatccacagagataaagcagctcaggtcccttctggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 681
Length adjustment: 9
Effective length of query: 278
Effective length of database: 672
Effective search space: 186816
Effective search space used: 186816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
