Query= MSMg01no275_d18.b1 MSMg01no275_d18.b1 CHROMAT_FILE:
MSMg01no275_d18.b1 PHD_FILE: MSMg01no275_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:56 2005
(355 letters)
>mm_chr1_188216900_188217658
Length = 759
Score = 652 bits (337), Expect = 0.0
Identities = 352/359 (98%), Gaps = 4/359 (1%)
Strand = Plus / Minus
Query: 1 aataaataaatgaaagagcaaacaaagaaacaaataaatgacgtttgttcttgggaagga 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 600 aataaataaatgaaagagcaaacaaagaaacaagtaaatgacgtttgttcttgggaagga 541
Query: 61 c----tttatgagaccacttgaggagtatagaggggttaggaaacaggttaaaaatgaag 116
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 540 ctttatttatgagaccacttgaggaatatagaggggttaggaaacaggttaaaaatgaag 481
Query: 117 tttgtcatgaggagaaagtaaaaagaagtgggcctatgaacatttcaaagggatgtgttt 176
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tttgtcatgaggagaaaggaaaaagaagtgggcctatgaacatttcaaagggatgtgttt 421
Query: 177 taaattctgggaaacatttaagacaaagttttataggatgaatgtggtattgcaagtgtg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 taaattctgggaaacatttaagacaaagttttataggatgaatgtggtattgcaagtgtg 361
Query: 237 tccctgaaaaatgagaaacagcttctcctgactgagacacctgatcaaataatcgctaag 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tccctgaaaaatgagaaacagcttctcctgactgagacacctgatcaaataatcgctaag 301
Query: 297 tctgagttggcagactccaggccgccctctctcctaggtctcacttgctcagcagccgc 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tctgagttggcagactccaggccgccctctctcctaggtctcacttgctcagcagccgc 242
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 759
Length adjustment: 9
Effective length of query: 346
Effective length of database: 750
Effective search space: 259500
Effective search space used: 259500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_d18.g1 MSMg01no275_d18.g1 CHROMAT_FILE:
MSMg01no275_d18.g1 PHD_FILE: MSMg01no275_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:56 2005
(282 letters)
>mm_chr1_188095496_188096177
Length = 682
Score = 540 bits (279), Expect = e-158
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 1 tttcctactttcaaaaccacaaaatgaaatcaaagaaataagatattttgcagacccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcctactttcaaaaccacaaaatgaaatcaaagaaataagatattttgcagacccagg 260
Query: 61 ttcccccttgatgagaggggtgaaagccaagcactggcctccggctggaaagaactttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcccccttgatgagaggggtgaaagccaagcactggcctccggctggaaagaactttaa 320
Query: 121 aaacttctgatttttatcatagggccaaatgacctgggcatatggtagccattacagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacttctgatttttatcatagggccaaatgacctgggcatatggtagccattacagccc 380
Query: 181 ctggctcgaagccctcccatgggcatgtgtatacctgtgattcagcacccaggtgcagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggctcgaagccctcccatgggcatgtgtatacctgtgattcagcacccaggtgcagca 440
Query: 241 gagggggagggtgacaaaacagagacagtaaggtgaacc 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagggggagggtgacaaaacagagacagtaaggtgaacc 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
