Query= MSMg01no275_n23.b1 MSMg01no275_n23.b1 CHROMAT_FILE:
MSMg01no275_n23.b1 PHD_FILE: MSMg01no275_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:41 2005
(698 letters)
>mm_chr1_151958664_151959761
Length = 1098
Score = 1295 bits (670), Expect = 0.0
Identities = 688/694 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtcattttcctccccaattccacctgtatcaacccggtcagtgtaatagtctc 64
||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 205 gaattctgtcagtttcctccccaattccacccgtatcaacccggtcagtgtaatcgtctc 264
Query: 65 ttaatggataaccctgctatccttccttttgcccaaaacattcttcttatgagagtttgc 124
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaatggacaaccctgctatccctccttttgcccaaaacattcttcttatgagagtttgc 324
Query: 125 atgttttaaatatcaatctagtcatggctctcctgtgtctgaaatcttctagtgacttct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgttttaaatatcaatctagtcatggctctcctgtgtctgaaatcttctagtgacttct 384
Query: 185 tatcctacaacacatagaagcttcttattctatgctgtagggaactcaattgtccatctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatcctacaacacatagaagcttcttattctatgctgtagggaactcaattgtccatctc 444
Query: 245 ctacctacctcattgagctaatatactgctcttcctgtacttgtcatatttcaatttctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctacctacctcattgagctaatatactgctcttcctgtacttgtcatatttcaatttctg 504
Query: 305 ctgttgggacaaaatgcttaagactgggtaatttggtcatggctgtggaagctaggcggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgttgggacaaaatgcttaagactgggtaatttggtcatggctgtggaagctaggcggg 564
Query: 365 ccaaagctatggggtttctctagaatgcttctgccccatatgtatcaatggatgcaggga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaaagctatggggtttctctagaatgcttctgccccatatgtatcaatggatgcaggga 624
Query: 425 aaatgggcaaactggctatgggaagaggaaggacatcactgtcctgttaagtcatggtgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaatgggcaaactggctatgggaagaggaaggacatcactgtcctgttaagtcatggtgg 684
Query: 485 agtgggaaagtacatttatcccttcttaaaggtaaagcccctatgatccagaagcctcag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtgggaaagtacatttatcccttcttaaaggtaaagcccctatgatccagaagcctcag 744
Query: 545 aagcacctggccaccttgcagtaatgtttatagccaattatatttcaacatgagttttgc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagcacctggccaccttgcagtaatgtttatagccaattatatttcaacatgagttttgc 804
Query: 605 taacaagtcacatgtaaaccacaggcacacctgcgtttcctacacctgtcatggtgcctt 664
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 805 taacaagtcacatgtaaaccacaggcacacctgtgtttcctacacctgtcatggtgcctt 864
Query: 665 tctgggatttgattattagcaatacttctcaaga 698
||||||||||||||||||||||||||||||||||
Sbjct: 865 tctgggatttgattattagcaatacttctcaaga 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_n23.g1 MSMg01no275_n23.g1 CHROMAT_FILE:
MSMg01no275_n23.g1 PHD_FILE: MSMg01no275_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:41 2005
(287 letters)
>mm_chr1_152005311_152005995
Length = 685
Score = 499 bits (258), Expect = e-146
Identities = 277/284 (97%), Gaps = 2/284 (0%)
Strand = Plus / Minus
Query: 1 cagggccaggaagcaggagtgggtgggttggtgagcaggggtaggccatagggaataagg 60
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 619 cagggccaggaagcaggagtgggtgggttggtgagcagggggaggggatagggaataagg 560
Query: 61 ggttttcggaggggaaaccaggaaagaggataacatttgaaatgtaaataaagaaaatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggttttcggaggggaaaccaggaaagaggataacatttgaaatgtaaataaagaaaatac 500
Query: 121 ctaataaaaaataaaaataaagtgagaatctcgttggaccaaatgattttttcctggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctaataaaaaataaaaataaagtgagaatctcgttggaccaaatgattttttcctggaca 440
Query: 181 tttctgtagtgttaaagttgtccattattgtcaaccttttttttttcctccatctttagc 240
||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 439 tttctgtagtgttaaagttgtccattattgttaacctttttttt--cctccatctttagc 382
Query: 241 cttttaaggactattataattttagatgctttcattttcaagta 284
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 cttttaaggaatattataattttagatgctttcattttcaagta 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 685
Length adjustment: 9
Effective length of query: 278
Effective length of database: 676
Effective search space: 187928
Effective search space used: 187928
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
