Query= MSMg01no275_p21.b1 MSMg01no275_p21.b1 CHROMAT_FILE:
MSMg01no275_p21.b1 PHD_FILE: MSMg01no275_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:50 2005
(679 letters)
>mm_chr1_156549090_156550168
Length = 1079
Score = 1295 bits (670), Expect = 0.0
Identities = 676/678 (99%)
Strand = Plus / Plus
Query: 1 caaaaacaaaaaaattatgattcaaagcaggctccctgactcctgaacccaggctttgct 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 201 caaaaacaaaaaaattatgattcaaagcaggctccctgactcctgaagcaaggctttgct 260
Query: 61 gcaagctcaaggggaggtggggccatggctagaaaagagaaacaccaactccctcccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaagctcaaggggaggtggggccatggctagaaaagagaaacaccaactccctcccagg 320
Query: 121 gcccagtcatcctgcagactgggatttcattctgtaattactgttatgacaaacacgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcccagtcatcctgcagactgggatttcattctgtaattactgttatgacaaacacgagc 380
Query: 181 cagatgtgtcactagtcttgcagttcaacctattctctggcaaattccacaactcagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagatgtgtcactagtcttgcagttcaacctattctctggcaaattccacaactcagggt 440
Query: 241 caggggagaaaggtagtgtatttcacaaagagggaaggacagagaccattctcctgtcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggggagaaaggtagtgtatttcacaaagagggaaggacagagaccattctcctgtcac 500
Query: 301 ccccatagagcagagcggggttgccagtgtaggacacagggcctaaagacctcttttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccccatagagcagagcggggttgccagtgtaggacacagggcctaaagacctcttttgta 560
Query: 361 cagaacagcaatcaccccaacgtaccccaaagcccctcttcccatttccactgtaaccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaacagcaatcaccccaacgtaccccaaagcccctcttcccatttccactgtaaccct 620
Query: 421 gtgttaatggcatcaaatgagtatctagggatctctggagagtggcaagcagtggccaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgttaatggcatcaaatgagtatctagggatctctggagagtggcaagcagtggccaag 680
Query: 481 tgtgcacagagacatcagtagccctccagttgctctggtcttgggccagcacaggaggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtgcacagagacatcagtagccctccagttgctctggtcttgggccagcacaggaggag 740
Query: 541 gtgacttttctagtccacagcatttggtagtaccatctcatccccaccaccaccatttcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgacttttctagtccacagcatttggtagtaccatctcatccccaccaccaccatttcc 800
Query: 601 acggatccctgagtcacaggcattctcccacagctggcagtccttccttcccacacatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acggatccctgagtcacaggcattctcccacagctggcagtccttccttcccacacatct 860
Query: 661 ccagttcacacacagcat 678
||||||||||||||||||
Sbjct: 861 ccagttcacacacagcat 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_p21.g1 MSMg01no275_p21.g1 CHROMAT_FILE:
MSMg01no275_p21.g1 PHD_FILE: MSMg01no275_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:50 2005
(666 letters)
>mm_chr1_156697424_156698491
Length = 1068
Score = 1272 bits (658), Expect = 0.0
Identities = 665/668 (99%), Gaps = 2/668 (0%)
Strand = Plus / Minus
Query: 1 tcttgggactgttctagttttctgtaatgcatgactgctcatgaatccggaaagtcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 868 tcttgggactgttctagttttctgtaatgcatgactgctcatgaatctggaaagtcccaa 809
Query: 61 gtgtcttcccaaccagaaaaggttcaaaccgaaacggaagaacggagagatgactgcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gtgtcttcccaaccagaaaaggttcaaaccgaaacggaagaacggagagatgactgcctg 749
Query: 121 tcatcagagttgtctcttctgtcctttcattctcagattcagcctgacacttattttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tcatcagagttgtctcttctgtcctttcattctcagattcagcctgacacttattttttt 689
Query: 181 gcttaagaaacaatgtgcagtttgtatctgcatgataatgcagacagaattcctatttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gcttaagaaacaatgtgcagtttgtatctgcatgataatgcagacagaattcctatttaa 629
Query: 241 gaggatcccactcagaggacaccagagcccctctgtccacctctaactttaggttaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gaggatcccactcagaggacaccagagcccctctgtccacctctaactttaggttaaaga 569
Query: 301 cccacaggtttgaggacagacttttctgtaagagcaaccctaactgcttcctcctgcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cccacaggtttgaggacagacttttctgtaagagcaaccctaactgcttcctcctgcaat 509
Query: 361 ggggctcctggtatctaaacttaatgattctttcaggtctcttgggtagcagagctggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggggctcctggtatctaaacttaatgattctttcaggtctcttgggtagcagagctggtg 449
Query: 421 ccatcaagcaggccccagcatgctgggtagggcagc--ttttttttttttgagtattgtg 478
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 448 ccatcaagcaggccccagcatgctgggtagggcagcttttttttttttttgagtattgtg 389
Query: 479 ctgtttgtcatgttgaatttggtaaatattttcctttcctagtaatgaatgacagcgact 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctgtttgtcatgttgaatttggtaaatattttcctttcctagtaatgaatgacagcgact 329
Query: 539 cagctgaaggcacaaaaggcactttgcctggatgttaattattgaggctgcacaaggaga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cagctgaaggcacaaaaggcactttgcctggatgttaattattgaggctgcacaaggaga 269
Query: 599 tcacagcaggatggctggccagaggcagctgcttgccttatagacaggagcaccgaagca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcacagcaggatggctggccagaggcagctgcttgccttatagacaggagcaccgaagca 209
Query: 659 accttcag 666
||||||||
Sbjct: 208 accttcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1068
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1058
Effective search space: 694048
Effective search space used: 694048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
