TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTGGATTTTTGTAAATCCCCATATTTCAGATCCCTGTTCCTGGTG
CCACTTATAGGTGATTCACTCTCCCAGGCCAAGGTTACATGATATAGGTC
CAAAAAATTGAACCAGACTGGTTCAAGGGACCACAACCAGTGTGAGGTGT
GACAATTTTAATGAGAGCAATTAGACATTTTATACCTGTTCCAGAAACAA
GATAATGGCAATTTCCAGGATTGATACAGTAGTTGCCAGGATGCAATAGT
TTGTGAAGTATACAGGGTACAGAGATTAATGTCAAAGATCAATTGTCCTG
TCAAGCTTCTATGTTTCTTTGACATACACAGAAACACCAAAAGGCCTGAA
TGCTTCACTGTCTGATGGAGTGTGTCTCTCAGGAAGTAGAAGGCACATGG
TGACCCAGGAGTATTCTAACCTGATAAATTCATAATGCATACCTCTTAGG
GTATCTAAGCCAGGCCAACTCAGTAGTTCCCACTAGAGTCCCAGTTCAGA
ATATATTCGTCAAGTACTCCTGAGAATTATTCCTGGCCTGGAGTGGTTAA
TATACCCAGAGTCATCCCATTGGAGAANACTGATCTTTCTGTCCCCTAGC
AGGTAATAACTGACAGGTCCATTGCATTTTTACCCAATGGCTAGCTTTTC
ATTTGTTAATTCGCTCATTTTTTATTCGTCATTTCATTTTTCAAATAAAA
CAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGGGGAATACCGAATGGCT
GAGAAACACCTGAAAAAAATCTTCAGCATCCTTAATCATCAGTGAAATGC
AAATCAAAACAACCTTGAGATTCCATCTCACAGGCAGTCAGTATGGCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG
GAACACTCCTCCACTGTTGGTAGGATTGCAAGCTTGTACATCCACTCTGG
AAATCAGTCTGGAGGTTTCTGGACATGGTACTACTGGAGGATCCCGCAAT
ACCTCTCCTGGGTATATATCCAGAACATGTTTCAACTAGTAAGAAAGAAA
CATGCTCCACTGTGTTCATCACAGCCTTATTTATAATAGCCAGAAGCTGG
AAGGAGCCCAGATGCCCCTCAACGAAGGAATGGATACAGAAAGTGTGGTA
CATTTTCACAATGGAGTACTAATCAGCTATTAAAAATAATGAATTTGTGA
AATTCCTGGGCAGATGGTTGGATATGGAGGGCATCATCCTGAGTGAGGTA
ACCCAATCACAAAAGAACTCAAATGATATGTACTCACTGGTAAGTGGATA
TTAGCCCAGAAACTTAGAATACCCAAGATATAAGTTACAATTTGCGAAAC
ACATGAGGCTCGGGAAGAACGAAGACCAAAGTGTGGACACTTTGCACCTT
CTTAGAATG

Query= MSMg01no276_g04.b1 MSMg01no276_g04.b1 CHROMAT_FILE:
MSMg01no276_g04.b1 PHD_FILE: MSMg01no276_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:19 2005
         (709 letters)



>mm_chr1_149885254_149886357
          Length = 1104

 Score = 1168 bits (604), Expect = 0.0
 Identities = 680/707 (96%), Gaps = 10/707 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttggatttttgtaaatccccatatttcagatccctgttcctggtgccacttat 64
           |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttggatttttgtaa---cccatatttcagatccctgttcctggtgccacttat 261

                                                                       
Query: 65  aggtgattcactct-cccaggccaaggttacatgatataggtccaaaaaattgaaccaga 123
           ||||||  |||| | ||| | |||||||||||||||||||||||||||| ||||||||||
Sbjct: 262 aggtgaaccact-taccc-gtccaaggttacatgatataggtccaaaaa-ttgaaccaga 318

                                                                       
Query: 124 ctggttcaagggaccacaaccagtgtgaggtgtgacaattttaatgagagcaattagaca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctggttcaagggaccacaaccagtgtgaggtgtgacaattttaatgagagcaattagaca 378

                                                                       
Query: 184 ttttatacctgttccagaaacaagataatggcaatttccaggattgatacagtagttgcc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttttatacctgttccagaaacaagataatggcaatttccaggattgatacagtagttgcc 438

                                                                       
Query: 244 aggatgcaatagtttgtgaagtatacagggtacagagattaatgtcaaagatcaattgtc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aggatgcaatagtttgtgaagtatacagggtacagagattaatgtcaaagatcaattgtc 498

                                                                       
Query: 304 ctgtcaagcttctatgtttctttgacatacacagaaacaccaaaaggcctgaatgcttca 363
           |||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 499 ctgtcaagcttccatgcttctttgacatacagagaaacaccaaaaggcctggatgcttca 558

                                                                       
Query: 364 ctgtctgatggagtgtgtctctcaggaagtagaaggcacatggtgacccaggagtattct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 559 ctgtctgatggagtgtgtctctcaggaagtagaaggcacatggtgacccaggaatattct 618

                                                                       
Query: 424 aacctgataaattcataatgcatacctcttagggtatctaagccaggccaactcagtagt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aacctgataaattcataatgcatacctcttagggtatctaagccaggccaactcagtagt 678

                                                                       
Query: 484 tcccactagagtcccagttcagaatatattcgtcaagtactcctgagaattattcctggc 543
           |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
Sbjct: 679 tcccactagagtcccagttcagaatatattggtcaagtactcctgagaattactcctgtc 738

                                                                       
Query: 544 ctggagtggttaatatacccagagtcatcccattggagaanactgatctttctgt-cccc 602
           |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 739 ctggagtggttaatatacccagagtcattccattggagaaaactgatctttctgttcccc 798

                                                                       
Query: 603 tagcaggtaataactgacaggtccattgcatttttacccaatggctagcttttcatttgt 662
            |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 799 -agcaagtaataactgacagttccattgcatttttacccaatggctagcttttcatttgt 857

                                                          
Query: 663 taattcgctcattttttattcgtcatttcatttttcaaataaaacaa 709
           ||||| |||||||||| |||| |||||||||||||||||||||||||
Sbjct: 858 taatttgctcattttt-attcatcatttcatttttcaaataaaacaa 903


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1104
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1094
Effective search space:   764706
Effective search space used:   764706
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)