Query= MSMg01no276_o09.b1 MSMg01no276_o09.b1 CHROMAT_FILE:
MSMg01no276_o09.b1 PHD_FILE: MSMg01no276_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:55 2005
(694 letters)
>mm_chr1_18659553_18660652
Length = 1100
Score = 1075 bits (556), Expect = 0.0
Identities = 622/648 (95%), Gaps = 12/648 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaacagtgtccatattgtgatcttagcctttcatcctttagaactatgagaaaa 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggaattcaacagtgttcatattgtgatcttagcctttcatcctttagaactatgagaaaa 583
Query: 64 taaatgttttattcgtttatgccagtgtgaactgactattagacttgctccacctgacag 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 taaatgttttatt-gtttatgccagtgtgaactgactattagacttgctccacctgacag 524
Query: 124 aaatttctagatcttaa-ttttttaaaaaaaattctgattttccacaataattcatttag 182
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaatttctagatcttaatttttttaaaaaaaattctgattttccacaataattcatttag 464
Query: 183 tctttatttttttcacaatagacactaagtccatcagaatactctaaatattcacaaacg 242
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 463 tctttatttttttcacaatagacactgagtccatcagaatactctaaatattcacaaacg 404
Query: 243 gtatgtcaacattctctcagactttaaagagtacatagttt--ttttgtttttcgttt-- 298
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 403 gtatgtcaacattctctcagactttaaagagtacatagttttgttttgttttttgttttt 344
Query: 299 -ttttttaagagaagcccatgtccgactaaacaattggatctgattatgcaagactgggt 357
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cttttttaagagaagctcatgtccgactaaacaattggatctgattatgcaagactgggt 284
Query: 358 ctggaaagattgcacagtgattaagatcattgactgctcttgaagagaacaggagttaag 417
|||||||||||| |||||| |||||||||||| ||||||||||||||| | |||||||||
Sbjct: 283 ctggaaagattgtacagtggttaagatcattggctgctcttgaagagacctggagttaag 224
Query: 418 tcttcagaaactaatggttaacaatcatctgtcactccagtagaaagggatccagtgatc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 223 tcttcagaaactaatggttaacaatcatctgtcactccagtagaaagggatccagtgctc 164
Query: 478 tcttctggtctctgtggggcacttcaagcatgtagtccacatacatacatgcaaagaaac 537
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tct-ctggtctctgtggggcacttcaagcatgtagtccacatacatacatgcaaagaaac 105
Query: 538 aaacgtgaccatcgttctcctttgctaattaatgtgttcaaggctgtttcccattttctc 597
||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||
Sbjct: 104 aaacgtgaccatcgttctcctgtgctaat----gtgttcaaggctgtttcccgttttctc 49
Query: 598 tttgattagattcagtgtgtattgctttatgatgaggttcaacaccag 645
|| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 48 ttcgattagattcagtgtgtattgctttatgttgaggttcaacaccag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1100
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1090
Effective search space: 745560
Effective search space used: 745560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_o09.g1 MSMg01no276_o09.g1 CHROMAT_FILE:
MSMg01no276_o09.g1 PHD_FILE: MSMg01no276_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:55 2005
(361 letters)
>mm_chr1_18493734_18494494
Length = 761
Score = 681 bits (352), Expect = 0.0
Identities = 358/360 (99%)
Strand = Plus / Plus
Query: 1 tgttcttgctctaaattacttaataaaaatatgaacacaatttcatagatctttctgaaa 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttcttgctctaaattacttaagaaaaatatgaacacaatttcatagatctttctgaaa 260
Query: 61 atctcaggaagacatgatcctaaaaaacactgtattccttctcactaaagtgacaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctcaggaagacatgatcctaaaaaacactgtattccttctcactaaagtgacaggaag 320
Query: 121 gtcatagctcacagtgtgcaaattgatcttacttggggaaaaaggaaaataccattcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcatagctcacagtgtgcaaattgatcttacttggggaaaaaggaaaataccattcaat 380
Query: 181 gaggtgaatggaaaaaattatatatggctagttagaaaatgactaaataagtagataaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggtgaatggaaaaaattatatatggctagttagaaaatgactaaataagtagataaat 440
Query: 241 gagtaattaaatgacagatggctattcagaataggatcaagtcaatttattgataataat 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtaattaaatgacagatggttattcagaataggatcaagtcaatttattgataataat 500
Query: 301 gtatggtgtatatataatgtgatagaggtaaagagagacacagagaaatgagagagagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatggtgtatatataatgtgatagaggtaaagagagacacagagaaatgagagagagag 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
