Query= MSMg01no277_p11.b1 MSMg01no277_p11.b1 CHROMAT_FILE:
MSMg01no277_p11.b1 PHD_FILE: MSMg01no277_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:11 2005
(318 letters)
>mm_chr1_83156850_83157567
Length = 718
Score = 532 bits (275), Expect = e-155
Identities = 305/315 (96%), Gaps = 2/315 (0%)
Strand = Plus / Minus
Query: 5 gaattcacttactctactctgaaatctctgcagtttctttacccaaatgtttcattgagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcacttactctactctgaaatctctgcagtttctttacccaaatgtttcattgagc 459
Query: 65 cgttgtattcagcccttaccctgagccaagttttaaggactttgttgtcaattacattta 124
||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 458 cgttgtagtcagccgttaccctgagccaagttttaagggctttgttgtcaattacattta 399
Query: 125 ttcatttatgttatgtgtatgtgcacacgcacacatgagagccacagaacatgtgtgcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttcatttatgttatgtgtatgtgcacacgcacacatgagagccacagaacatgtgtgcag 339
Query: 185 aggttaaaaaataactttcctcactgcagccctccccaccccacctcc-aacccttttat 243
|||| | |||||||||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct: 338 aggtcagaaaataactttcctcactgcggccctccccaccccacc-cctgacccttttat 280
Query: 244 ttttaatttgagtttctagaagctgagagttctcctcctattttgtcctcaacaagttgt 303
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttttaatttgagtttcgagaagctgagagttctcctcctattttgtcctcaacaagttgt 220
Query: 304 atttcagttattctc 318
|||||||||||||||
Sbjct: 219 atttcagttattctc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_p11.g1 MSMg01no277_p11.g1 CHROMAT_FILE:
MSMg01no277_p11.g1 PHD_FILE: MSMg01no277_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:11 2005
(236 letters)
>mm_chr1_82997717_82998352
Length = 636
Score = 447 bits (231), Expect = e-130
Identities = 234/235 (99%)
Strand = Plus / Plus
Query: 1 gcacatgggatctggttgggttatgctgtgacattctacagtgcctgtaattctcaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcacatgggatctggttgggttatgctgtgacattctacagtgcctgtaattctcaccag 260
Query: 61 tgacttgctttcccattgcattgacatatctgtaatcacaaagcttctcttgcttaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgacttgctttcccattgcattgacatatctgtaatcacaaagcttctcttgcttaataa 320
Query: 121 acttcagcaaaccgctctcaaactgttgcctcctgtgtgtctcgcttgctttctagtctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcagcaaaccgctctcaaactgttgcctcctgtgtgtctcgcttgctttctagtctc 380
Query: 181 tcaactctctttccatgggagaaataagtttcatctcatctgatagggcattctg 235
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 tcaactctctttccatgggagaaataagtttcatctcatcagatagggcattctg 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
