CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAATAATATCAAAAACAGTTTACATTAGTGGTATATCTTGATCAT
GTATTACAAGCAAAGTACTTAACCTCTGGTGAACTATCCATCCATTATAT
ACTGACTTGTAACTTGTTAAACAAATCTATATAAGAGAAGTATTGCCGGG
CAGTGACGGCGCATACCTTTAATCCCAGCACTTGGGAGACAGAGGCAGGT
AGATTTCTGAGTGCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACA
GCCTGGGCTTTACAGAGAAATCCTGTCTTGAAAAACAAAAACAAAAACAA
AAACAAACAAACAAAAACAACCCAAAAACAAAAACAGAGAGAAGTATTAA
GATTCTAGGACCGGGACATATAAACACTATCAGGAGCCTAGCTGTCAGCT
TGAGCAGCAGCCTGGTCACTGTTGTCCTCATGGACAGCTGCATGAGAACA
TGTGATCCTGCATGAAGGTAGAAGGCTCCTCAGGCAAACTCATGAACATG
TATGACTTTCAGATGGGCAATAGCTTGAGCATGCATCTGATGGCTTGAAA
CTGCTTCTGATGGCTGAACTCACACAAGAAAATCATGAACACTATGTTTC
TATCAAGGTGACAGATTGAAGAGGACAAAGGCCTCTGCCCACAGCCCAGA
CCATACTGAGAATGGATCACTGCTTGCAAAAGATTTTCCCACTCCCACCT
CTTCCAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGCTCCACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAG
ATCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACCGAAGA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAA
GTGGATATTAGCCCAAAACCTAAGATACCCAAGATATAAGATACAATTTC
CTAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGAACACTAT

Query= MSMg01no279_e13.b1 MSMg01no279_e13.b1 CHROMAT_FILE:
MSMg01no279_e13.b1 PHD_FILE: MSMg01no279_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:50 2005
         (712 letters)



>mm_chr1_132504665_132505776
          Length = 1112

 Score = 1019 bits (527), Expect = 0.0
 Identities = 560/571 (98%)
 Strand = Plus / Minus

                                                                        
Query: 142  gaagtattgccgggcagtgacggcgcatacctttaatcccagcacttgggagacagaggc 201
            |||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||
Sbjct: 1112 gaagtattgccgggcagtgatggttcacacctttaatcccagcacttgggagacagaggc 1053

                                                                        
Query: 202  aggtagatttctgagtgcgaggccagcctggtctacagagtgagttccaggacagcctgg 261
            ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1052 aggcagatttctgagtgcgaggccagcctggtctacagagtgagttctaggacagcctgg 993

                                                                        
Query: 262  gctttacagagaaatcctgtcttgaaaaacaaaaacaaaaacaaaaacaaacaaacaaaa 321
            ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992  gctttacagagtaaccctgtcttgaaaaacaaaaacaaaaacaaaaacaaacaaacaaaa 933

                                                                        
Query: 322  acaacccaaaaacaaaaacagagagaagtattaagattctaggaccgggacatataaaca 381
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 932  acaacccaaaaacaaaaacagagagaagtgttaagattctaggaccgggacatataaaca 873

                                                                        
Query: 382  ctatcaggagcctagctgtcagcttgagcagcagcctggtcactgttgtcctcatggaca 441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872  ctatcaggagcctagctgtcagcttgagcagcagcctggtcactgttgtcctcatggaca 813

                                                                        
Query: 442  gctgcatgagaacatgtgatcctgcatgaaggtagaaggctcctcaggcaaactcatgaa 501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812  gctgcatgagaacatgtgatcctgcatgaaggtagaaggctcctcaggcaaactcatgaa 753

                                                                        
Query: 502  catgtatgactttcagatgggcaatagcttgagcatgcatctgatggcttgaaactgctt 561
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 752  catgtatgactttcagatgggcaatagcttgagcatgcatgtgatggcttgaaactgctt 693

                                                                        
Query: 562  ctgatggctgaactcacacaagaaaatcatgaacactatgtttctatcaaggtgacagat 621
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692  ctgatggctcaactcacacaagaaaatcatgaacactatgtttctatcaaggtgacagat 633

                                                                        
Query: 622  tgaagaggacaaaggcctctgcccacagcccagaccatactgagaatggatcactgcttg 681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632  tgaagaggacaaaggcctctgcccacagcccagaccatactgagaatggatcactgcttg 573

                                           
Query: 682  caaaagattttcccactcccacctcttccag 712
            |||||||||||||||||||||||||||||||
Sbjct: 572  caaaagattttcccactcccacctcttccag 542


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space:   773604
Effective search space used:   773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)