Query= MSMg01no280_d01.b1 MSMg01no280_d01.b1 CHROMAT_FILE:
MSMg01no280_d01.b1 PHD_FILE: MSMg01no280_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:58 2005
(648 letters)
>mm_chr1_79417671_79418717
Length = 1047
Score = 1149 bits (594), Expect = 0.0
Identities = 635/656 (96%), Gaps = 13/656 (1%)
Strand = Plus / Plus
Query: 5 gaattcattatcatttttccggaaaaaaaaaaagtgcccagtatacaactcaaggaactg 64
||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcattataattcttcaggaaaaaaaaaa-gtgcccagtatacaactcaaggaactg 263
Query: 65 gtctgaattttacatattgcataataggacttgcacagttgagctgctgtcctggttacc 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtctgaattttacatattgtataataggacttgcacagttgagctgctgtcctggttacc 323
Query: 125 ccaggagtaacctcttgctttaaaattgcattgtgacttcatttgataaattttaaatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaggagtaacctcttgctttaaaattgcattgtgacttcatttgataaattttaaatga 383
Query: 185 atttctaggagttgtaatcatgaggggatcaggtatgcttctaaacaaagttaatttaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atttctaggagttgtaatcatgaggggatcaggtatgcttctaaacaaagttaatttaac 443
Query: 245 tcttctgctctttctgtaattttatttgctttatttcatttccttatagggggaaacaac 304
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 444 tcttctgctctttctgtaattgtatttgctttatttcatttccttatatggggaaacaac 503
Query: 305 aaaaatacactactatctacacactctgtgtgcacaca------------cacacatgta 352
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 504 aaaaatacactactatctacacactctgtgtgcacacatggacacacacacacacatgta 563
Query: 353 tgcaaagataatctgagaggccagaagtcagtgtcagatatcttccttaatcaatctcca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgcaaagataatctgagaggccagaagtcagtgtcagatatcttccttaatcaatctcca 623
Query: 413 ccctattttttgaaataaggtagagcctctcactgaatctggagaccactgattggctag 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccctattttttgaaataaggtagagcctctcactgaatctggagaccactgattggctag 683
Query: 473 actggctggccattgagctccattggtcagcttgtctctgcttctccaacactagaatta 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 actggctggccattgagctccattggtcagcttgtctctgcttctccaacactagaatta 743
Query: 533 tgatgtgcacccccatgcctggcttttacttaggcactagacatccaaactctcatgctt 592
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 744 tgatgtgcacccccatacctggcttttacttaggcactggacatccaaactctcatgctt 803
Query: 593 gttcaggccttttattaactgagccacctccccatcctttataacctatttctaaa 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gttcaggccttttattaactgagccacctccccatcctttataacctatttctaaa 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1047
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1037
Effective search space: 661606
Effective search space used: 661606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_d01.g1 MSMg01no280_d01.g1 CHROMAT_FILE:
MSMg01no280_d01.g1 PHD_FILE: MSMg01no280_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:58 2005
(362 letters)
>mm_chr1_79602781_79603542
Length = 762
Score = 615 bits (318), Expect = e-180
Identities = 351/362 (96%)
Strand = Plus / Minus
Query: 1 tcaaggtggcaagcagtgcctaggaaaagaatataatatccttttctttcctcctcctga 60
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 562 tcaaggtggcaggcagtgcctaggaaaagaatataatatccctttctttcctcctcctga 503
Query: 61 tgttccaccggtccctcacagtgtgggaaacaggatttccttaccagaggttgaaaaagc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgttccaccagtccctcacagtgtgggaaacaggatttccttaccagaggttgaaaaagc 443
Query: 121 aatcaatctttcattactttcattaacaaatgtaaagacattttttaataataaaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 442 aatcaatctttcattactttcattaacaaatgtaaagacattttttaataataaagtgaa 383
Query: 181 tgaatcttctcatcttgaaatctcttaaaataatagtaaagctttcaaccaatagaccat 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 382 tgaatcttctcatcttgaaatctcttaaaacaatagtaaagctttcaaccaatagaccat 323
Query: 241 gctttgaaacctaaaaattcttccaagatgcttattatcaaatcaataaagcatcattaa 300
|||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||
Sbjct: 322 gctttgaaacctaaaaattcctccaagatgcttattatcaaaccaataaaacatcattaa 263
Query: 301 tgagtggcattgaattttacctcaccaaggcttcttcaataaacacattgataaatgctg 360
||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgagtggcattaaatttcacctcgccaaggcttcttcaataaacacattgataaatgctg 203
Query: 361 gt 362
||
Sbjct: 202 gt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
