Query= MSMg01no290_c08.b1 MSMg01no290_c08.b1 CHROMAT_FILE:
MSMg01no290_c08.b1 PHD_FILE: MSMg01no290_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:36 2005
(318 letters)
>mm_chr1_148661814_148662531
Length = 718
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 5 gaattctctaacattcactcagtactttgtaaagaaactatgcatatttgagattattaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctaacattcactcagtactttgtaaagaaactatgcatatttgagattattaa 264
Query: 65 tcaagccatatctgatagtagtaattgacatatccactaggttcaaaactgtgctatcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaagccatatctgatagtagtaattgacatatccactaggttcaaaactgtgctatcag 324
Query: 125 tttgagataggcaaatggactcagatgacaactaagtaatacaatttccatgtttatcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgagataggcaaatggactcagatgacaactaagtaatacaatttccatgtttatcat 384
Query: 185 tgtatctatttatatgggttttccaatgagttctaacaattcaatactatactctgccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtatctatttatatgggttttccaatgagttctaacaattcaatactatactctgccca 444
Query: 245 ttttctccttagaagatactttgtaaggttgtttctgatacctgtttgtatttcagcaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttctccttagaagatactttgtaaggttgtttctgatacctgtttgtatttcagcaca 504
Query: 305 ttttctttcctta 317
|||||||||||||
Sbjct: 505 ttttctttcctta 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_c08.g1 MSMg01no290_c08.g1 CHROMAT_FILE:
MSMg01no290_c08.g1 PHD_FILE: MSMg01no290_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:36 2005
(289 letters)
>mm_chr1_148824490_148825177
Length = 688
Score = 511 bits (264), Expect = e-149
Identities = 282/288 (97%), Gaps = 4/288 (1%)
Strand = Plus / Minus
Query: 1 ctgatctctccaagacttttaacatgaaggtgtgcttcattttgtcacaggtttttttca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 619 ctgatctctccaagacttttaacatgaaggtgtgcttcattttgtcaaaggtttttttca 560
Query: 61 gcacttaatgagatgatcatgtgattttttttctttgagtttgtttatatagtggatta- 119
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 559 gcacttaatgagatgatcatgtga-tttttttctttgagtttgtttatatagtggattat 501
Query: 120 tgttgttgga-ttttttttagtaaaaaatatgctttataactaatgacaaacaaataaaa 178
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgttgttggatttttttttagt-aaaaatatgctttataactaatgacaaacaaataaaa 442
Query: 179 cacttacaaatatctcctctgaaaattgtttgctctcatataatagtaataatgaggtta 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacttacaaatgtctcctctgaaaattgtttgctctcatataatagtaataatgaggtta 382
Query: 239 atgaaatactctatgtgaagatagagaataaaacctattttataattc 286
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaaatactctatgtgaagatagagaataaaacctattttataattc 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
