TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCATGATCGTGGGCCCACTGTCGTACTTCTCTGGCTGTGAAATGAGTTCC
TTGGTCAGAAGCAATACTGTGCGGAATACCATGACGATAAATAAGGCATT
CTATCAGTCCATGAATGGTGGTTTTAGCAGAGGCATTACGTGCAGGAAAG
GCAAATCCATAACCAGAATAAGTATCTACTCCAGTAAGAACAAAACGCTG
TCCTTTCCATGAAGGAAGTGGTCCAATGTTGCAGGTTGCTGGCTGGTCAC
CTCGAGGAATGGTGCCATATCTGGGTCTCAGTGTTGGTTTCTGCTGTTGG
CAGATCTGGCAATCTTCAGCAGCTGTAGCCAGGTCAGCTTTGGTGAGTGG
AAGCCCGTGTTGCTGACCCCAAGCATAACCTCCATCTCGACCACCATGGC
CACTTTGTTCATGTGCCCATTGAGCAATGACAGGGATGGCTGGGGAGAGA
GGCTGACTGTCCACAGAACGGGTCATCTTATCCACTTGATTATTGAACTC
CTCCTCGGCTGAAGTCACCTTTTGGTGAGCATTTACATGGGACACAAATA
TCTTCACATCCTTTGCCCATTTGGAGAGATCTATCCACATACTTCTTCCC
CAGATGTCTTTCTCACCAATTTTCCAATTGTGATCTTTCCAAGTCCCTGA
CCATCCAGCCAATCCATTGGCTACAGCCCATTGAGTCAGTGAATAATCAT
ACATCTGGNCATTTCTTCTTGCAGACA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTCCTAGTCACTCCCATTCTCGGGGT
GTAATAGTGGGGTGATGGGCAAGCAACGAACCAGGAGCTGTCACGCCATA
TCAGGTGCTGAAACGTCACGCTGCGGGTTATAAAAGCAGCGCCATTTTCC
CGGTTTGGGATCTTCCTGAGAAACAAGCAATAAAGCTTTTGCCGCGGAAG
ATTCTGGTTTGTTGCGTCTTTCTTGCCGGTCGAGCGGGACGCAATACTTT
CCTATAGGAGACATTTAATAATGACAGGGAGTTAGTTACATGTTACCTTT
AATCACATTCAAGATCTATCAGCTACTTATACATGTCATTTATTATTCTT
CCCTTAACTTATAAGCAATTTGAAAGGTAGGGCACAAAATTAGAGGTTTT
ACATGCCTAAACATTATATGTCAAATAATTATATTATCACACACACACAC
AAAGAATTAATGTAATAAAATTACTTTACATCATTACCCTTCATTCCATA
TCATTTATTTAGTAGATGTTACTCAAATTATGATGAAGTTATGATCTGAT
AAGCCCTTCATACTTTGAAAATATCAATAGTTCAACCTTTCTTCAATACA
CTGAGCATCATAGTTTAGTCAGGGATGTCTGACATGCACTTACTGCACCC
ATTTGACCTTAGGGTTGGGACAAATATTGTAGCACAAAGCCTGTTTTACT
CCAACGTGACATAGTTCAGGTACTT

Query= MSMg01no295_e23.g1 MSMg01no295_e23.g1 CHROMAT_FILE:
MSMg01no295_e23.g1 PHD_FILE: MSMg01no295_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:12 2005
         (658 letters)



>mm_chr1_32881340_32882397
          Length = 1058

 Score =  714 bits (369), Expect = 0.0
 Identities = 420/455 (92%), Gaps = 30/455 (6%)
 Strand = Plus / Minus

                                                                       
Query: 224 ctttcctataggagacatttaataatgacagggagttagttacatgttacctttaatcac 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctttcctataggagacatttaataatgacagggagttagttacatgttacctttaatcac 569

                                                                       
Query: 284 attcaagatctatcagctacttatacatgtcatttattattcttcccttaacttataagc 343
           |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 568 attcaaaatctagcagctacttatatatgtcatttattattcttcccttaacttataagc 509

                                                                       
Query: 344 aatttgaaaggtagggcacaaaattagaggttttacatgcctaaacattatatgtcaaat 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aatttgaaaggtagggcacaaaattagaggttttacatgcctaaacattatatgtcaaat 449

                                                                       
Query: 404 aattatattat--------------------cacacacacacacaaagaattaatgtaat 443
           |||||||||||                    ||||||||||||||||||||||| | |||
Sbjct: 448 aattatattatcacacacacacacacacacacacacacacacacaaagaattaacgcaat 389

                                                                       
Query: 444 aaaattactttacatcattacccttcattccatatcatttatttagtagatgttactcaa 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaaattactttacatcattacccttcattccatatcatttatttagtagatgttactcaa 329

                                                                       
Query: 504 attatgatgaagttatgatctgataagcccttcatactttgaaaatatcaatagttcaac 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 attatgatgaagttatgatctgataagcccttcatactttgaaaatatcaatagttcaac 269

                                                                       
Query: 564 ctttcttcaatacactgagcatcatagtttagtcagggatgtctgacatgcacttactgc 623
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||      
Sbjct: 268 ctttcttcaatacactgagcatcatagtttagtcagggatgtctgac-tgcact------ 216

                                              
Query: 624 acccatttgaccttagggttgggacaaatattgta 658
              ||||||||||||||||||||||||||||||||
Sbjct: 215 ---catttgaccttagggttgggacaaatattgta 184


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)