Query= MSMg01no295_f12.b1 MSMg01no295_f12.b1 CHROMAT_FILE:
MSMg01no295_f12.b1 PHD_FILE: MSMg01no295_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:15 2005
(225 letters)
>mm_chr1_161529280_161529904
Length = 625
Score = 393 bits (203), Expect = e-114
Identities = 218/223 (97%), Gaps = 2/223 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgcagtattcctctctccctatagcttgcagcacaaccattctctctgcctgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggaattctgcagtattcctctctccctatagcttgcagcacaaccattctctctgcctgg 366
Query: 64 atat-catatccatctcctctccttgtggttagccaacagttaatggtctactctgagtt 122
|| | |||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 at-tccatatctatcttctctccttgtggttagccaacagttaatggtctactctgagtt 307
Query: 123 tgcaaagtctagaaaatgtcctcacaggcaccagattggggtcatgaaattcatttcact 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgcaaagtctagaaaatgtcctcacaggcaccagattggggtcatgaaattcatttcact 247
Query: 183 cacactatgacctctgccactgcagtatttcttgtcttctggg 225
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 246 cacactatgacctctgccactgcagtatttcttgccttctggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no295_f12.g1 MSMg01no295_f12.g1 CHROMAT_FILE:
MSMg01no295_f12.g1 PHD_FILE: MSMg01no295_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:15 2005
(119 letters)
>mm_chr1_161368153_161368670
Length = 518
Score = 199 bits (103), Expect = 4e-56
Identities = 115/119 (96%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 1 agtatccatttttcatggggtcctagagggttaacatattaactagcatcattcattcct 60
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 agtatccatttt-catggggtcctagagggttaacatattaactagtatcattcattcct 259
Query: 61 atgagaatcattcattcattcattcacccaccatccatcttttataaaagtttgatatc 119
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 260 atgagaatcatttattcattcattcacccaccatccatcttttagaaaagtttgatatc 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 518
Length adjustment: 8
Effective length of query: 111
Effective length of database: 510
Effective search space: 56610
Effective search space used: 56610
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
