Query= MSMg01no297_f09.b1 MSMg01no297_f09.b1 CHROMAT_FILE:
MSMg01no297_f09.b1 PHD_FILE: MSMg01no297_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:45 2005
(690 letters)
>mm_chr1_154888880_154889969
Length = 1090
Score = 1268 bits (656), Expect = 0.0
Identities = 677/684 (98%), Gaps = 1/684 (0%)
Strand = Plus / Plus
Query: 5 gaattcttctcatatgccttccc-tgacagacactgcagcacagctccctcaagtgtgct 63
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttctcatatgtcttcccctgacagacactgcagcacagctccctcaagtgtgct 263
Query: 64 ttcatgccagcttgatttgcactcatgtgtatgcatgcacgtgcgtgtatgtgtgtgcac 123
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 264 ttcatgccagcttgatttgcacacatgtgtatgcatgcacgtgcgtgtttgtgtatgcac 323
Query: 124 acacaagcgtatgtctattaaaaataaacaccagcgctaataaacaaatatagcaaggct 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcacaagcgtatgtctattaaaaataaacaccagcgctaataaacaaatatagcaaggct 383
Query: 184 ataggttccatggagcaaggactgggtttgtttggttcacctctggaacatctgcaccct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataggttccatggagcaaggactgggtttgtttggttcacctctggaacatctgcaccct 443
Query: 244 agctggggatccaggatagagcagggccttctgagtcaaaattaggggtctggaaataaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agctggggatccaggatagagcagggccttctgagtcaaaattaggggtctggaaataaa 503
Query: 304 gtaagagaaacaagtctgaatgcatttccacatcacaagtgccagtttgtagtctactgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtaagagaaacaagtctgaatgcatttccacatcacaagtgccagtttgtagtctactgt 563
Query: 364 gcaaatatttaatttcattttcttatgcccaaactctactgagctcatggtgcctggctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcaaatatttaatttcattttcttatgcccaaactctactgagctcatggtgcctggctc 623
Query: 424 ccccttggcaagactttcagagttggcatttctgctaccctctgagaaatttcagaactt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccccttggcaagactttcagagttggcatttctgctaccctctgagaaatttcagaactt 683
Query: 484 catctctccttatctccttttctacctcctctcactcatagttcagaacttcttcctgat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 catctctccttatctccttttctacctcctctcactcatagttcagaacttcttcctgat 743
Query: 544 gctgaaggagagagagacagccactcctgtcagtcttcttggacatctgccatgctcatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gctgaaggagagagagacagccactcctgtcagtcttcttggacatctgccatgctcatg 803
Query: 604 tgccttgcatggtatttgttcccctgggcttcacaacacgaacctgagggaagctgagaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgccttgcatggtatttgttcccctgggcttcacaacacgaacctgagggaagctgagaa 863
Query: 664 acggagccttccaggttctatggg 687
| ||||||||||||||||||||||
Sbjct: 864 atggagccttccaggttctatggg 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_f09.g1 MSMg01no297_f09.g1 CHROMAT_FILE:
MSMg01no297_f09.g1 PHD_FILE: MSMg01no297_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:45 2005
(242 letters)
>mm_chr1_154938801_154939441
Length = 641
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 1 atgtgtagcccagtggcccatcccagttcccacggtacacggaggcagctgccacctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atgtgtagcccagtggcccatcccagttcccacggtacacggaggcagctgccacctgta 380
Query: 61 ttgctgtgaacctggagtctgtctgtcagcaggggcagcacagctctccttttcagaagc 120
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 379 ttgctgtgaacctggagtctgtctgtcagcaggggcatcatggctctccttttcagaagc 320
Query: 121 caagaattcttcattatccctccctgtcagacacgggggatccctttcccttccagaaag 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 319 caagaattcttcattatccctccctgtcagacac-ggggatccctttcccttccagaaag 261
Query: 181 caaaagcagtcagaggaggctagccagactggggagccagagggggtttcccccagcaga 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 260 caaaagcagtcagaggaggctagccagactggggagccagaggggatttcccccagcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 641
Length adjustment: 9
Effective length of query: 233
Effective length of database: 632
Effective search space: 147256
Effective search space used: 147256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
