TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTGATAACGTTACCTATTCAGTAACATACAAATTTACTTCTAGTA
GAGACAGTGAAACTAATTAGGCATTATCCCGTCCCACGGGATTCAGTTAT
TCGTGGGTGTGAGGGGGACCACGAACCTGGAAGGAAATGGGAGTAAAAGA
AAGAAAGTCGGAGGACCAAGTAGATAACAACCTATCAAGGTCTCGTTTAT
TAGGCTGAGGTGCCTTCTTTATAAAGCATACATCGCGGGGAATATGGGAG
GGGTCGAGGGAGAATTATACAAAGAACAAAGAAGTGGGCATCTGCTGACA
TGGGGGCTGAAGTCAGGCGCCAGGCAGCGGGCACTCTGGATCTTATCTCT
GGAACATCAATCCTCCTTGACAGCCTTGGGGGTCAGGCTGGGCTCAGGCA
TAACTCATGTCCTTGGATGGCATGGGAACTCAGGAAGAGATAGGGAAGAG
GGGACTATAATTCAGCTTTTACAGCCTCAGGTGCCAAGAAAGGAATAGGG
AGGAAGGGGGGTGATAACCTGCTTTTAGTACAAGGCCATTTGGCCTGTTA
GGGAGATTGTGAAGGGCTCACTTTCTCACGGGATGGTCTCTGACAAGGCA
TTACAAAGAACCAAGCAGGTATTGCTCAGGGTTGGTCTGCAGAGTGTTTA
CTTGAGACAATAGCCAGTCTTACACAGAAAAG

CCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATTTCCTCATGAGTAAAGTGGGA
TTAATAGTGCATATTGCAAAGTATTGTTTTGAGAATCATAAGAGCCATGA
TGTCTCCAAGGTCCTGGGGGGAATAGTGCTTGTTGGGTATTAGTGAATAA
ATATCATGAATAAAATGGGTATCTGACTTAAATCATCAAAAGTAACTCAC
AAGAATGTAAAATGAAATACTCCTGTACAATTTGACATAGATTTCACTAA
TGTGAGAAAGACTGTGAGAAAGACTGACAGATGATAAATGTTATTTTGAC
TGCAATATTAAGGAAGAGGCTCATTTTAAAGAGTCATGACTCAGACATAA
CACAAAAATCTTGACTCTTGTATGGGGTATTTAAAAGATATATACTACAT
ATACTGCATATGTGATCATTATATCTGAATCTATAAAAGTCTTTTTCCTA
TTTTATGGTTACCATGATGATTGCACTTCAGTAAATTTTTATTTACTCTT
CACTAAAAAAATATTTTTGACCCACAATAGTTTACAGTAAACAAATTAAT
GGGAATGACAAAAGAAAGATAATGAAACAATATTAATTATCCAAAGAACT
GGTTATGTGTATTAAGCCCCACAGATATCTACATAGTCATTCAAGTTAAT
GAATAAACGTCCTGCATGAAGATAAAATTCACCCACT

Query= MSMg01no297_g12.g1 MSMg01no297_g12.g1 CHROMAT_FILE:
MSMg01no297_g12.g1 PHD_FILE: MSMg01no297_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:51 2005
         (648 letters)



>mm_chr1_27336459_27337504
          Length = 1046

 Score = 1218 bits (630), Expect = 0.0
 Identities = 643/648 (99%), Gaps = 2/648 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatttcctcatgagtaaagtgggattaatagtgcatattgcaaagtattgttttgagaat 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 846 tatttcctcatgagtaaagtgcgattaatagtgcatattgcaaagtattgttttgagaat 787

                                                                       
Query: 61  cataagagccatgatgtctccaaggtcctggggggaatagtgcttgttgggtattagtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 cataagagccatgatgtctccaaggtcctggggggaatagtgcttgttgggtattagtga 727

                                                                       
Query: 121 ataaatatcatgaataaaatgggtatctgacttaaatcatcaaaagtaactcacaagaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ataaatatcatgaataaaatgggtatctgacttaaatcatcaaaagtaactcacaagaat 667

                                                                       
Query: 181 gtaaaatgaaatactcctgtacaatttgacatagatttcactaatgtgagaaagactgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 666 gtaaaatgaaatactcctgtacaatttgacatagatttcactaatgtgagaaagagtgtg 607

                                                                       
Query: 241 agaaagactgacagatgataaatgttattttgactgcaatattaaggaagaggctcattt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 606 agaaagactgacagatgataaatgttattttgactgcaatattaaggaagtggctcattt 547

                                                                       
Query: 301 taaagagtcatgactcagacataacacaaaaatcttgactcttgtatggggtatttaaaa 360
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 546 taaagagtcatgactcagacataacacaaaaatcttga--cttgtatggggtatttaaaa 489

                                                                       
Query: 361 gatatatactacatatactgcatatgtgatcattatatctgaatctataaaagtcttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gatatatactacatatactgcatatgtgatcattatatctgaatctataaaagtcttttt 429

                                                                       
Query: 421 cctattttatggttaccatgatgattgcacttcagtaaatttttatttactcttcactaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cctattttatggttaccatgatgattgcacttcagtaaatttttatttactcttcactaa 369

                                                                       
Query: 481 aaaaatatttttgacccacaatagtttacagtaaacaaattaatgggaatgacaaaagaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaatatttttgacccacaatagtttacagtaaacaaattaatgggaatgacaaaagaa 309

                                                                       
Query: 541 agataatgaaacaatattaattatccaaagaactggttatgtgtattaagccccacagat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agataatgaaacaatattaattatccaaagaactggttatgtgtattaagccccacagat 249

                                                           
Query: 601 atctacatagtcattcaagttaatgaataaacgtcctgcatgaagata 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atctacatagtcattcaagttaatgaataaacgtcctgcatgaagata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1046
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1036
Effective search space:   660968
Effective search space used:   660968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)