Query= MSMg01no298_i17.b1 MSMg01no298_i17.b1 CHROMAT_FILE:
MSMg01no298_i17.b1 PHD_FILE: MSMg01no298_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:15 2005
(360 letters)
>mm_chr1_69478218_69478977
Length = 760
Score = 685 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Plus
Query: 7 agagagagagagagagagattgagattctggggctaggaagatgtttcgatttataaaag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 agagagagagagagagagattgagattctggggctaggaagatgtttcgatttataaaag 266
Query: 67 ggttagcataatggtctgagttcaaatctccagcacccatacaaaaggctgagtgtacac 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggttagcataatggtctgagttcaaatctccagcacccatacaaaaggctgagtgtacac 326
Query: 127 agagaaaccctgtctggaaaaacaaaaaacaaaacaaaacaaaaaaggctgagtatggtc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agagaaaccctgtctggaaaaacaaaaaacaaaacaaaacaaaaaaggctgagtatggtc 386
Query: 187 acatgtatatttgtacccccagcaccgtgggggcagagataacaaatggctagatcttgg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 acatgtatatttgtacccccagcaccgtgggggcagagataacaaatggctagatcttgg 446
Query: 247 aaactgtcagctgggctccaggatcaagacaatctcaacagactaagggaaggcatgagg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaactgtcagctgggctccaggatcaagacaatctcaacagactaagggaaggcatgagg 506
Query: 307 acacctgagatgcccctcaaatcatgtacacctgcaaaacaaatgctaatagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 acacctgagatgcccctcaaatcatgtacacctgcaaaacaaatgctaatagaa 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_i17.g1 MSMg01no298_i17.g1 CHROMAT_FILE:
MSMg01no298_i17.g1 PHD_FILE: MSMg01no298_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:15 2005
(195 letters)
>mm_chr1_69640893_69641487
Length = 595
Score = 342 bits (177), Expect = 6e-99
Identities = 193/203 (95%), Gaps = 8/203 (3%)
Strand = Plus / Minus
Query: 1 tattgctccagtgatgctggctttaactgtaaaggacctgattcttttgttttcagtaat 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 309 tattgctccagtgatgctggctttaactgtaaagggcctgattcttttgttttcagtaat 250
Query: 61 aaaaatttgagactttcctggatccttttcctactcccagactttgtgatttgttttgc- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaaaatttgagactttcctggatccttttcctactcccagactttgtgatttgttttgct 190
Query: 120 -------tgtttgtttgtttgtttgtttgctctagagcctttactctccagggagtactg 172
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 189 gtttgtttgtttgtttgtttgtttgtttgttctagagcctttactctccagggagtactg 130
Query: 173 tgtccttttcagggaactggttg 195
|||||||||||||||||||||||
Sbjct: 129 tgtccttttcagggaactggttg 107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
