CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCATGTCCTGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTC
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTCGTTTTATGTGAAGTTCTTTGAT
CCATTTAGATTTGACCTTACNACAAGGAGATAAGTATGGATCGATTCACA
TTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGT
CTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCT
CTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTTTT
ATCCTTGAGAAGACTTTTTGCTATCCTAGGCTTTTTGTTATTCCAGAT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCAGGTCCACGAGATGATTCA
AAAACTGAACAGAATGGTGACAACCTCCGGATTTAAAACCACAGTGCAGC
TCTCTCCCTGTAGGCTGGGGACATACAAAGTGCTCTGTTAGCCTTAGCCA
CTCCATACTTGTCTAATTGTCAATCACCTCTCTGTATTCTTGTAGTGTAT
TTTTGCTGGGTGGAACTTGGATGACTCTTCTCCATGTTAATGATGGTTTC
ATCATTACTATGTCCGAGAAGCAGAGATTTCAGGGAATGAAGAAGTTTGG
TGATTTCCTCTCATGAAATTAATTTACCTTTTTAATGCTATTTTTCCTTG
AATCTTCAACGTTGGAAAAATTGTGTGTAAATATATGTGTGAGCACATGT
GTGTTGATCTATGGACTGAACTGAGGACATGTTGCACATGTTAGGCAAGC
GTTCTACCACTGACTTCTGCCATTACCCTTCATTTTAGGGCTTTGTTCTG
AGACAGGATCTTATTCTGTTACCCTGGCTGGTCTGGAAATCACCACTTTG
CCCAGGCTGACCTCAAACTTGTGTCAGTCTTCCTATCTCGGTCTTTTGAA
AGCTGGTATTACAGGCCATGCCACCAGATTCAAATTCCCAACATTTTAAC
AGAAAACACTCAGATAGCATCATCTCTTTGTAGTACTGGAGAAAT

Query= MSMg01no299_i13.g1 MSMg01no299_i13.g1 CHROMAT_FILE:
MSMg01no299_i13.g1 PHD_FILE: MSMg01no299_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:29 2005
         (669 letters)



>mm_chr1_139585089_139586157
          Length = 1069

 Score = 1294 bits (669), Expect = 0.0
 Identities = 669/669 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttcaggtccacgagatgattcaaaaactgaacagaatggtgacaacctccggatttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttcaggtccacgagatgattcaaaaactgaacagaatggtgacaacctccggatttaa 260

                                                                       
Query: 61  aaccacagtgcagctctctccctgtaggctggggacatacaaagtgctctgttagcctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccacagtgcagctctctccctgtaggctggggacatacaaagtgctctgttagcctta 320

                                                                       
Query: 121 gccactccatacttgtctaattgtcaatcacctctctgtattcttgtagtgtatttttgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccactccatacttgtctaattgtcaatcacctctctgtattcttgtagtgtatttttgc 380

                                                                       
Query: 181 tgggtggaacttggatgactcttctccatgttaatgatggtttcatcattactatgtccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggtggaacttggatgactcttctccatgttaatgatggtttcatcattactatgtccg 440

                                                                       
Query: 241 agaagcagagatttcagggaatgaagaagtttggtgatttcctctcatgaaattaattta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaagcagagatttcagggaatgaagaagtttggtgatttcctctcatgaaattaattta 500

                                                                       
Query: 301 cctttttaatgctatttttccttgaatcttcaacgttggaaaaattgtgtgtaaatatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctttttaatgctatttttccttgaatcttcaacgttggaaaaattgtgtgtaaatatat 560

                                                                       
Query: 361 gtgtgagcacatgtgtgttgatctatggactgaactgaggacatgttgcacatgttaggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgagcacatgtgtgttgatctatggactgaactgaggacatgttgcacatgttaggc 620

                                                                       
Query: 421 aagcgttctaccactgacttctgccattacccttcattttagggctttgttctgagacag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagcgttctaccactgacttctgccattacccttcattttagggctttgttctgagacag 680

                                                                       
Query: 481 gatcttattctgttaccctggctggtctggaaatcaccactttgcccaggctgacctcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatcttattctgttaccctggctggtctggaaatcaccactttgcccaggctgacctcaa 740

                                                                       
Query: 541 acttgtgtcagtcttcctatctcggtcttttgaaagctggtattacaggccatgccacca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttgtgtcagtcttcctatctcggtcttttgaaagctggtattacaggccatgccacca 800

                                                                       
Query: 601 gattcaaattcccaacattttaacagaaaacactcagatagcatcatctctttgtagtac 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gattcaaattcccaacattttaacagaaaacactcagatagcatcatctctttgtagtac 860

                    
Query: 661 tggagaaat 669
           |||||||||
Sbjct: 861 tggagaaat 869


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)