Query= MSMg01no300_p10.b1 MSMg01no300_p10.b1 CHROMAT_FILE:
MSMg01no300_p10.b1 PHD_FILE: MSMg01no300_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:14 2005
(199 letters)
>mm_chr1_4536494_4537092
Length = 599
Score = 366 bits (189), Expect = e-106
Identities = 195/197 (98%), Gaps = 2/197 (1%)
Strand = Plus / Minus
Query: 2 agaagagaagagaagagaa-agaagagaagagaaatgccagcccctcccctcaaaatcag 60
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agaagagaagagaa-agaagagaagagaagagaaatgccagcccctcccctcaaaatcag 372
Query: 61 tcttgcacttattacagtgaaaagtacccttgctgtttgtgcaatttggaagtcattggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcttgcacttattacagtgaaaagtacccttgctgtttgtgcaatttggaagtcattggt 312
Query: 121 ggtctttaaaagaagaaaactacatactgacatgagatgagggagagttttagaatatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggtctttaaaagaagaaaactacatactgacatgagatgagggagagttttagaatatga 252
Query: 181 agaaaggaatctagatg 197
|||||||||||||||||
Sbjct: 251 agaaaggaatctagatg 235
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no300_p10.g1 MSMg01no300_p10.g1 CHROMAT_FILE:
MSMg01no300_p10.g1 PHD_FILE: MSMg01no300_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:14 2005
(228 letters)
>mm_chr1_4480389_4481017
Length = 629
Score = 393 bits (203), Expect = e-114
Identities = 219/229 (95%), Gaps = 9/229 (3%)
Strand = Plus / Plus
Query: 4 ctggactgggtttgcagctcaaaggtggttctcttgtctcccttgatgaagctgtggctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctggactgggtttgcagctcaaaggtggttctcttgtctcccttgatgaagctgtggctt 263
Query: 64 cagtccccagcctgtatggggactggaaaatgagagaatagcgctcaactgggaggcagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagtccccagcctgtatggggactggaaaatgagagaatagcgctcaactgggaggcagg 323
Query: 124 cttgctcagaccgaagctgtgcagaatgacactaaggaaacacctggcacaggaaaagcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttgctcagaccgaagctgtgcagaatgacactaaggaaacacctggcacaggaaaagcc 383
Query: 184 cacaaatttt-----atttcctatgatggccatgtggaccgcagcactc 227
|||||| | ||||||||||||||||||||||||||||||||
Sbjct: 384 cacaaa----ccagcagttcctatgatggccatgtggaccgcagcactc 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 629
Length adjustment: 9
Effective length of query: 219
Effective length of database: 620
Effective search space: 135780
Effective search space used: 135780
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
