Query= MSMg01no305_b21.b1 MSMg01no305_b21.b1 CHROMAT_FILE:
MSMg01no305_b21.b1 PHD_FILE: MSMg01no305_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:39 2005
(425 letters)
>mm_chr1_76608428_76609253
Length = 826
Score = 781 bits (404), Expect = 0.0
Identities = 407/408 (99%), Gaps = 1/408 (0%)
Strand = Plus / Minus
Query: 16 gaattc-gcaacttgtttactctgctactttcagcctcctcttctggctacagatgtctc 74
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattcagcaacttgtttactctgctactttcagcctcctcttctggctacagatgtctc 502
Query: 75 caaatattgctgcagttatttgtgttttcatctataattattttcacaacaagagttttt 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaatattgctgcagttatttgtgttttcatctataattattttcacaacaagagttttt 442
Query: 135 ttaatccctgtgtaggctttaaagggggaaaaagaacccagcacttgggaaaaaaaacac 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaatccctgtgtaggctttaaagggggaaaaagaacccagcacttgggaaaaaaaacac 382
Query: 195 ctaacttcttcttccctgtctgaaaatttctgtaatgtgtccttagaaacaattaaagat 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaacttcttcttccctgtctgaaaatttctgtaatgtgtccttagaaacaattaaagat 322
Query: 255 ggaaatgcatcatcagaaatgtagcaacacagagaagggaattggactgagaaggctgga 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaatgcatcatcagaaatgtagcaacacagagaagggaattggactgagaaggctgga 262
Query: 315 ccatgatctcattctgcaatttattctggaagtgaatttgccaagggttgttattgttgt 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatgatctcattctgcaatttattctggaagtgaatttgccaagggttgttattgttgt 202
Query: 375 tgttgctgtcattgttgttgttttaatcctattttgatctcactttct 422
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttgctgtcattgttgttgttttaatcctattttgatctcactttct 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space: 339872
Effective search space used: 339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_b21.g1 MSMg01no305_b21.g1 CHROMAT_FILE:
MSMg01no305_b21.g1 PHD_FILE: MSMg01no305_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:39 2005
(382 letters)
>mm_chr1_76435904_76436685
Length = 782
Score = 719 bits (372), Expect = 0.0
Identities = 378/380 (99%)
Strand = Plus / Plus
Query: 1 ctggtctatttaggtctgagacttccaagaacctgtgtaagagccatgggaacctatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtctatttaggtctgagacttccaagaacctgtgtaagagccatgggaacctatagg 260
Query: 61 caaatgctaccaggaagttcctcagaaaatactcgctgttaatctgggtcataacctcaa 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 caaatgctaccaggaagttcctcagaaaatactcgctgttagtctgggtcataacctcaa 320
Query: 121 tgacctgccatagaattttgggatcaagagcttaccgagttccaatgattttatgaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacctgccatagaattttgggatcaagagcttaccgagttccaatgattttatgaccag 380
Query: 181 taagattgggtttctttttttcagtcaaattttggcttttatttctgtaaggaattaaaa 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 taagattgggtttctttttttcagtcaaattttggctttcatttctgtaaggaattaaaa 440
Query: 241 actaagttgggtttaaccactctcttgcccatggtctgtgtcagttggagatttcagggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actaagttgggtttaaccactctcttgcccatggtctgtgtcagttggagatttcagggt 500
Query: 301 ttaaacaacaaatatttcttgttcacctctctaaaggcttgcatggcataacttctggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaacaacaaatatttcttgttcacctctctaaaggcttgcatggcataacttctggtg 560
Query: 361 agggatatctttcttcttca 380
||||||||||||||||||||
Sbjct: 561 agggatatctttcttcttca 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
