Query= MSMg01no305_c10.b1 MSMg01no305_c10.b1 CHROMAT_FILE:
MSMg01no305_c10.b1 PHD_FILE: MSMg01no305_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:43 2005
(415 letters)
>mm_chr1_73228059_73228873
Length = 815
Score = 719 bits (372), Expect = 0.0
Identities = 396/408 (97%), Gaps = 10/408 (2%)
Strand = Plus / Plus
Query: 14 ggaattcacaa-tactttgagctgtcc-ccattactgggaaccagtgttaaatacttgtg 71
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 212 ggaattcacaaatactttgagctgtccaccattactgggaaccagtgttaaatacttgtg 271
Query: 72 gaacccttaagaatcttaggcaacgtgtgtcttacaaatatatatctgggtacaatgagg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaacccttaagaatcttaggcaacgtgtgtcttacaaatatatatctgggtacaatgagg 331
Query: 132 atgaatcaatttattttattttattttatttattttattttattttttggtcagaaggga 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atgaatcaatttattttattttattttatttattttattttattttttggtcagaaggga 391
Query: 192 ccctacattcattatctctctcttacttccaggaggtacttgcccaagggtgaggaaggc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ccctacattcattatctctctcttacttccaggaggtacttgcccaagggtgaggaaggc 451
Query: 252 ttctttgtcaccttaccccacatcaccatgacaggatatgagaggcaccaaatgctgggc 311
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttctttgtcatcttaccccacatcaccatgacaggatatgagaggcaccaaatgctgggc 511
Query: 312 taagctgagacagagctcaattgctaaaagttactttactatttattggcaga----ttt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 512 taagctgagacagagctcaattgctaaaagttactttactatttattggcagagcagt-- 569
Query: 368 ttgtctgcagaaagagtttcaggagcaatctgaagacccaggaacagt 415
| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 --ggctgcagaaagagtttcaggagcaatctgaagacccaggaacagt 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_c10.g1 MSMg01no305_c10.g1 CHROMAT_FILE:
MSMg01no305_c10.g1 PHD_FILE: MSMg01no305_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:43 2005
(204 letters)
>mm_chr1_73395686_73396289
Length = 604
Score = 371 bits (192), Expect = e-107
Identities = 201/204 (98%)
Strand = Plus / Minus
Query: 1 ttatatatgaagacataagcactaagttttagttagatatctctaaatcatacttgcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttatatatgaagacataagcactaagttttagttagatatctctaaatcatacttgcaag 279
Query: 61 tttttatagaagatgaggaattctggggggataatggtatgaatagaaaaaaagctagtg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 278 tttttatagaagatgaggaattctggggggataatggtatgaatagaataaaagctagtg 219
Query: 121 ttcccccctaaaattcaaacaagaagaaggagaaggggaggagaaagaggagggggagaa 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttcccccctaaaattcaagcaagaagaaggagaaggggaggagaaagaggagggggagaa 159
Query: 181 gagggaagaggaggaggaggagga 204
|||||||||| |||||||||||||
Sbjct: 158 gagggaagagaaggaggaggagga 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
