MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-305D12
Chromosome	1 (Build37)
Map Location	73,228,307 - 73,229,098
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
Downstream gene	Pinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mreg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381269 MGI:2151839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pecr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111175 MGI:2148199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem169 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271711 MGI:2442781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xrcc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22596 MGI:104517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	March4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381270 MGI:2683550
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smarcal1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54380 MGI:1859183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319695 MGI:2442559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl37a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19981 MGI:98068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igfbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16008 MGI:96437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igfbp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16011 MGI:96440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672187 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100042860 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042860
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tnp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21958 MGI:98784
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700027A15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69449 MGI:1916699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs

name	Pinc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:723792 MGI:3623820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672208 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100043291 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043291
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Tns1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21961 MGI:104552
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 258 ESTs, 2 Proteins

name	Rufy4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435626 MGI:3588214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il8rb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12765 MGI:105303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mreg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53749211 GeneID:381269 MGI:2151839
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoregulin transcript_id : NM_001005423.1

name	Pecr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350282 GeneID:111175 MGI:2148199
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisomal trans-2-enoyl-CoA reductase transcript_id : NM_023523.4

name	Tmem169 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801443 GeneID:271711 MGI:2442781
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 169 transcript_id : NM_175564.3

name	Xrcc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753976 GeneID:22596 MGI:104517
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X-ray repair complementing defective repair in Chinese hamster cells 5 transcript_id : NM_009533.1

name	March4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865912 GeneID:381270 MGI:2683550
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane-associated ring finger (C3HC4) 4 transcript_id : NM_001045533.1

name	Smarcal1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055347 GeneID:54380 MGI:1859183
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 transcript_id : NM_018817.1

name	Ankar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387175 GeneID:319695 MGI:2442559
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin and armadillo repeat containing transcript_id : NM_176980.3

name	Rpl37a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384175 GeneID:19981 MGI:98068
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L37a transcript_id : NM_009084.3

name	Igfbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982259 GeneID:16008 MGI:96437
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor binding protein 2 transcript_id : NM_008342.2

name	Igfbp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909321 GeneID:16011 MGI:96440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor binding protein 5 transcript_id : NM_010518.2

name	LOC100042860 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233890 GeneID:100042860
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042860 transcript_id : XM_001478941.1

name	Tnp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678394 GeneID:21958 MGI:98784
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transition protein 1 transcript_id : NM_009407.1

name	1700027A15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363484 GeneID:69449 MGI:1916699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs product : RIKEN cDNA 1700027A15 gene transcript_id : XM_993673.1

name	LOC100043291 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233930 GeneID:100043291
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043291 transcript_id : XM_001480012.1

name	Tns1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363486 GeneID:21961 MGI:104552
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 258 ESTs, 2 Proteins product : tensin 1 transcript_id : XM_619639.3

name	Rufy4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364398 GeneID:435626 MGI:3588214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RUN and FYVE domain containing 4 transcript_id : NM_001034060.2

name	Il8rb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299639 GeneID:12765 MGI:105303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 8 receptor, beta transcript_id : NM_009909.3

name	Mreg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53749212 CCDS:CCDS15032.1 GeneID:381269 MGI:2151839
definition	GO_process : GO:0042640 - anagen [Evidence IMP]; GO:0048066 - pigmentation during development [Evidence IMP] codon_start : 1 note : dilute suppressor protein product : whn-dependent transcript 2 protein_id : NP_001005423.1

name	Pecr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980804 GeneID:111175 MGI:2148199
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0005777 - peroxisome [Evidence ISS] [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0019166 - trans-2-enoyl-CoA reductase (NADPH) activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0030497 - fatty acid elongation [Evidence ISS]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : perosisomal 2-enoyl-CoA reductase product : peroxisomal trans 2-enoyl CoA reductase protein_id : NP_076012.2

name	Tmem169 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425360 CCDS:CCDS15033.1 GeneID:271711 MGI:2442781
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC271711 protein_id : NP_780773.1

name	Xrcc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753977 GeneID:22596 MGI:104517
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005958 - DNA-dependent protein kinase complex [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004003 - ATP-dependent DNA helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : Ku p80; Ku autoantigen product : X-ray repair complementing defective repair in Chinese hamster cells 5 protein_id : NP_033559.1

name	March4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865913 CCDS:CCDS15034.1 GeneID:381270 MGI:2683550
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : membrane-associated ring finger (C3HC4) 4 protein_id : NP_001038998.1

name	Smarcal1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055348 GeneID:54380 MGI:1859183
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008094 - DNA-dependent ATPase activity [Evidence IDA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 protein_id : NP_061287.1

name	Ankar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892815 CCDS:CCDS15035.1 GeneID:319695 MGI:2442559
definition	codon_start : 1 exception : mismatches in translation product : ankyrin and armadillo repeat containing protein_id : NP_795954.1

name	Rpl37a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677785 GeneID:19981 MGI:98068
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : ribosomal protein L37a protein_id : NP_033110.1

name	Igfbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982260 CCDS:CCDS15036.1 GeneID:16008 MGI:96437
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0019838 - growth factor binding [Evidence IEA]; GO:0005520 - insulin-like growth factor binding [Evidence IEA] GO_process : GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 product : insulin-like growth factor binding protein 2 protein_id : NP_032368.2

name	Igfbp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909322 CCDS:CCDS15037.1 GeneID:16011 MGI:96440
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0016942 - insulin-like growth factor binding protein complex [Evidence IC] GO_function : GO:0019838 - growth factor binding [Evidence IEA]; GO:0005520 - insulin-like growth factor binding [Evidence IPI] [Evidence IEA] GO_process : GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 product : insulin-like growth factor binding protein 5 protein_id : NP_034648.2

name	LOC100042860 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233891 GeneID:100042860
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478991.1

name	Tnp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678395 GeneID:21958 MGI:98784
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0001673 - male germ cell nucleus [Evidence TAS]; GO:0000786 - nucleosome [Evidence IEA] [Evidence ISS]; GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence ISS]; GO:0006342 - chromatin silencing [Evidence ISS]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0035042 - fertilization, exchange of chromosomal proteins [Evidence ISS]; GO:0006337 - nucleosome disassembly [Evidence ISS]; GO:0019953 - sexual reproduction [Evidence ISS]; GO:0000012 - single strand break repair [Evidence ISS]; GO:0030317 - sperm motility [Evidence ISS]; GO:0007290 - spermatid nuclear elongation [Evidence ISS]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 product : transition protein 1 protein_id : NP_033433.1

name	1700027A15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363485 GeneID:69449 MGI:1916699
definition	codon_start : 1 product : hypothetical protein LOC69449 protein_id : XP_998767.1

name	LOC100043291 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233931 GeneID:100043291
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480062.1

name	Tns1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363487 GeneID:21961 MGI:104552
definition	codon_start : 1 product : tensin 1 protein_id : XP_619639.3

name	Rufy4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702191 CCDS:CCDS15039.1 GeneID:435626 MGI:3588214
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RUN and FYVE domain containing 4 protein_id : NP_001029232.1

name	Il8rb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753456 CCDS:CCDS15040.1 GeneID:12765 MGI:105303
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016494 - C-X-C chemokine receptor activity [Evidence IEA]; GO:0004950 - chemokine receptor activity [Evidence TAS] [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004918 - interleukin-8 receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0006935 - chemotaxis [Evidence TAS]; GO:0006952 - defense response [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : IL-8 receptor alpha chain; interleukin-8 receptor type B; chemokine (C-X-C) receptor 2 product : interleukin 8 receptor beta protein_id : NP_034039.1

name	LOC672187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672187
definition	number : 5 pseudo : _no_value

name	LOC672187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672187
definition	number : 4 pseudo : _no_value

name	LOC672187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672187
definition	number : 3 pseudo : _no_value

name	LOC672187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672187
definition	number : 2 pseudo : _no_value

name	LOC672187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672187
definition	number : 1 pseudo : _no_value

name	LOC672208 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672208
definition	number : 1 pseudo : _no_value

name	LOC672208 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672208
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:271661
definition	standard_name : PMC17958P1

name	(CDS detail)
type	STS
link
xref	UniSTS:160916
definition	standard_name : RH118241

name	(CDS detail)
type	STS
link
xref	UniSTS:178411
definition	standard_name : AI314015

name	(CDS detail)
type	STS
link
xref	UniSTS:178199
definition	standard_name : G66995

name	(CDS detail)
type	STS
link
xref	UniSTS:178412
definition	standard_name : AI851716

name	(CDS detail)
type	STS
link
xref	UniSTS:130229
definition	standard_name : D5Mit109

name	(CDS detail)
type	STS
link
xref	UniSTS:241021
definition	standard_name : D4Mon68

name	(CDS detail)
type	STS
link
xref	UniSTS:471313
definition	standard_name : Igfbp2

name	(CDS detail)
type	STS
link
xref	UniSTS:178409
definition	standard_name : AI255832

name	(CDS detail)
type	STS
link
xref	UniSTS:158806
definition	standard_name : L05439

name	(CDS detail)
type	STS
link
xref	UniSTS:210076
definition	standard_name : RH136081

name	(CDS detail)
type	STS
link
xref	UniSTS:178410
definition	standard_name : AW208790

name	(CDS detail)
type	STS
link
xref	UniSTS:273484
definition	standard_name : PMC85624P4

name	(CDS detail)
type	STS
link
xref	UniSTS:224179
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:143490
definition	standard_name : Igfbp5

name	(CDS detail)
type	STS
link
xref	UniSTS:240381
definition	standard_name : D9Wox32

name	(CDS detail)
type	STS
link
xref	UniSTS:128634
definition	standard_name : D1Mit281

name	(CDS detail)
type	STS
link
xref	UniSTS:224656
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:225117
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128741
definition	standard_name : D1Mit380

name	(CDS detail)
type	STS
link
xref	UniSTS:271682
definition	standard_name : PMC18293P1

name	(CDS detail)
type	STS
link
xref	UniSTS:158808
definition	standard_name : X12521

name	(CDS detail)
type	STS
link
xref	UniSTS:158807
definition	standard_name : X12521

name	(CDS detail)
type	STS
link
xref	UniSTS:270992
definition	standard_name : PMC141152P1

name	(CDS detail)
type	STS
link
xref	UniSTS:128635
definition	standard_name : D1Mit282

name	(CDS detail)
type	STS
link
xref	UniSTS:128900
definition	standard_name : D1Mit532

name	(CDS detail)
type	STS
link
xref	UniSTS:128848
definition	standard_name : D1Mit482

name	(CDS detail)
type	STS
link
xref	UniSTS:111358
definition	standard_name : AU046535

name	(CDS detail)
type	STS
link
xref	UniSTS:111358
definition	standard_name : AU046535

name	(CDS detail)
type	STS
link
xref	UniSTS:207171
definition	standard_name : BE200114

name	(CDS detail)
type	STS
link
xref	UniSTS:703
definition	standard_name : STS-Z40715

name	(CDS detail)
type	STS
link
xref	UniSTS:116252
definition	standard_name : D1Mit19

name	(CDS detail)
type	STS
link
xref	UniSTS:128934
definition	standard_name : D1Mit77

name	(CDS detail)
type	STS
link
xref	UniSTS:178413
definition	standard_name : AI648117

name	(CDS detail)
type	STS
link
xref	UniSTS:234149
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128519
definition	standard_name : D1Mit180

name	(CDS detail)
type	STS
link
xref	UniSTS:122836
definition	standard_name : 05.MMHAP84FRB8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142236
definition	standard_name : D1Mcg105

name	(CDS detail)
type	STS
link
xref	UniSTS:272638
definition	standard_name : PMC310709P2

name	(CDS detail)
type	STS
link
xref	UniSTS:141355
definition	standard_name : Cmkar2

name	(CDS detail)
type	STS
link
xref	UniSTS:158811
definition	standard_name : D17630

name	(CDS detail)
type	STS
link
xref	UniSTS:124880
definition	standard_name : L23637

name	Pinc (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:115392000 GeneID:723792 MGI:3623820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pregnancy induced noncoding RNA transcript_id : NR_003202.1

clone name	MSMg01-415I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192K11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-305D12.T7 (MSMg01no305_d12.b1)	MSMg01-305D12.TJ (MSMg01no305_d12.g1)
ACC	AG430262	AG430263
length	1,342	1,266
length of high quality (start - end)	793 (92 - 884)	159 (127 - 285)
definition	CHROMAT_FILE: MSMg01no305_d12.b1 PHD_FILE: MSMg01no305_d12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:44:52 2005	CHROMAT_FILE: MSMg01no305_d12.g1 PHD_FILE: MSMg01no305_d12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:44:52 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NCCATACCNNNNNNCGTCATTGGGCGCTAAGACTCACTAAGGGAGAGGAT CCGCGGAATTCACAAATACTTTGAGCTGCCCTTAATGACTGGGAACCAGT GTTAAATACTTGTGGAACCCTTAAAAATCTTAGGCAACGTGTGTCTTACA AATATATATCTGGGTACAATGAGGATGAATCAATTTATTTTACTTTATTT TATTTATTTTATTTTATTTTTTGGTCAGAAGGGACCCTACATTCATTATC TCTCTCTTACTTCCAGGAGGTACTTGCCCAAGGGTGAGGAAGGCTTCTTT GTCACCTTACCCCACATCACCATGACAGGATATGAGAGGCACCAAATGCT GGGCTAAGCTGAGACAGAGCTCAATTGCTAAAAGTTACTTTACTATTTAT TGGCAGAGCTTTTTCTGCAGAAAGAGTTTCAGGAGCAATCTGAAGACCCA GGAACAGTCCATTTTTTTTGCCCCGCCCCTGTCACAGAAGTGGACACATA CCAAAAATTTTTTTCATTGCATTCTTTCTGAGTTTGGTGAGAGTATTGTT TCTTAGGCAATGATTTCCTATTAATATAACAACAAAAAGGCTAACACCTT GGAAGCTAGGCATGCTGAGAAAGCAAGTGAGAACTCATTAGATGGGGACC TACACCAGCCCCAGAGAGGAACTCAGACAATTAGAGACTTTCAAGGTATA GGTATAGACTCAGAAATGCATCAAGTAGACTAGACAAAAAAGCCACTCTC TCCTCTGGCTGTTTCCTCAGAGCCTGAATTTTCTGACAGGGTTCTTGGCT AATTCATTTTACATAAGCCTCTTTCTTATAAGACTGTTCAGTTTGGGTCT AGGGTTTTGTGCTACCTTCTCTCTGCAGTCCTGAACACCAATTTATGATG CCAAGTTTAGGATTGGCCCACCTACTATTTTCAGGTCACAAGCCCCTCTC AACTCATGGTTGGACTGCCTCTGATTCATGGAGAACAATCTGGTTCACTT GGGCCAAATTTGGGAATGGGGTCAAAAAACATACCCCCTTTTAAAATAAT GTCTGAAATAAAATTCTCCCAAAAACACCAAGAAATTAAAAGGGACCTTT CTCAAACAAAATTTATTAAAGTGTCCACCTTAAATGGGAGTGTGAAAACT AATTCTTGGGGTGTTCTTTCAAAAATTTTTAAATCTTGACACGGGAGGCG TTCACCCCTTTCCCTCTTTAATTTATGATTGTCGTGAGAAACCCACTCTC CATTATGGATGTGGGGTTTTAATCTGGGTTCTCTCTCTACAAAAAGTCAT ATGATATTCGTGAATAGTTCATCAAAATCTCAACACTTTTTT	CCGCACTTTTNNNNAACGCATGGAGGCTGGXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCTTATATATGAAGACATAA GCACTAAGTTTTAGTTAGATCCCTCTAAATCATACTTGCAAGTTTTTATA GAAGATGAGGAATTCTGGGGGGATAATGGTATGAATAGAAAAAAAGCTAG TGTTCCCCCCTAAAATTCAAACAAGAAGAAGGAGAAGGGGAGGAGAAAGA GGAGGGGGAGAAGAGGGAAGAGGAGGAGGAGGNNNNNNNNNNNGNNNNNN NGNNNNNNAGGNGGNGGNGNGNNGGGGGGGGGNNNNGTTGNNNNGGGNNG GGGGGGGGGGGGGNGGGGGGNGGGGGGGGGGGGNGNNGGGGGGGGGGGGG GGGTTTTTTTTTGGGGGGGGGNNGGGGGGGGGGGGGGGGGGGGGNGGGCC CCCTTTTTTTTCCCCCCCCCCGGTGGGTGTCTTTTGTTTAAAAAAAGAGC GGGTCTATATTTTTTATTTATAGGATAATTATTATCACTTAGTTGTTTCG GTTTTCTATTATTTTATGTATATCATCTTTCTTTAATTCCCTTTTCTCTA ATTGTTGTTTTCTCTAAGTTTTTATTTGTATAAAGTTGTCTTGCCTTTTT AGTTTTTTCTATATTTTAATTATAGAATATATATCTTTATAAATATTCAA TTCCTTTTTTTTATGTGTATTTATACTCTCTATTTGTTATTTCTTCTTCT ACGCTGCTTTTATAAATAAGAATTCCTTTTTTTTTTTTTATATTACTCAT TTAACTAACAATGAAATCTTTTATATAATACAACCTCTTTTTTGTTTTCA TTTCAAGCTATCTTTGTCGTTTTTTTTTTCTCCACCTTTTATACAAAGTG TTTTATTTTTTTTTTTATTTTTTTTCTTCTTACTTTTCTTCGTTATATGA AGATATTTAGTCTTTCTGTATTATCTTTCTTTTTTTAAATACTCATATAT CTATTTACTTTTCCTCCCGACAAGTACAACTGCTATTTTCTTATTATTCT TCTTATAAATATTCTTATTTTACATAAACTTTTATTTATTGTTCTTTTTT AAAAGCTATCNCTAAGATAATTCCTATGCTTTATATTTGTATGAATATTT TTCTTATATCATTTATTTTATCTTTGTCTTAAGATCATTCCGTTCACTAT TTTATTTATCGATATGCTTTTAATATAAACATTACTTCTTTTTCCACTTC TCTTCTTCTGTATTTT
quality values	Open. Hide. 0 3 6 6 8 8 9 3 0 0 0 0 0 0 3 7 6 7 7 7 7 7 8 9 10 10 8 8 8 8 8 19 17 18 22 13 15 8 8 8 19 21 28 28 28 28 30 33 33 39 37 37 41 37 37 37 32 28 32 41 41 41 42 37 37 41 41 53 41 41 39 37 37 25 21 10 9 9 9 9 9 9 8 8 8 7 7 7 15 18 19 15 23 30 31 31 31 35 35 35 35 35 36 36 50 53 36 36 31 31 31 30 28 25 24 30 23 13 11 16 17 11 11 11 13 20 30 37 31 27 27 20 24 32 41 46 57 57 57 57 57 53 53 53 47 47 47 47 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 51 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 44 25 21 11 11 10 13 24 32 43 57 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 47 43 57 44 48 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 27 25 12 11 11 11 13 10 10 9 10 11 23 25 59 59 50 50 50 50 53 53 53 57 59 59 57 53 53 50 50 50 57 59 59 57 57 57 57 50 50 57 57 57 57 57 57 53 53 50 48 41 37 37 31 23 23 9 11 11 16 18 20 24 28 31 28 18 13 8 8 8 8 8 8 10 10 21 30 41 50 50 50 50 53 48 48 48 48 41 41 36 34 22 22 12 11 12 12 16 14 12 12 12 19 29 34 39 30 34 37 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 59 59 59 59 68 68 59 57 54 54 54 54 54 57 57 57 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 57 59 59 59 59 57 57 57 54 54 54 68 68 68 68 68 68 68 57 54 54 57 57 57 57 57 59 59 43 43 43 59 59 59 44 44 39 40 40 44 59 48 48 57 59 59 59 48 59 59 48 42 42 40 41 39 39 37 32 32 37 37 37 39 40 40 40 48 48 44 48 48 48 37 37 37 48 48 57 59 57 57 57 57 57 57 57 48 48 48 48 48 48 48 48 47 47 59 47 37 31 37 31 37 41 44 47 47 47 46 46 48 59 59 59 59 59 47 59 43 41 41 41 41 36 41 44 59 59 59 59 41 41 48 48 48 48 48 47 47 47 47 44 41 40 36 37 41 41 41 37 37 44 59 59 36 34 19 19 12 19 15 26 34 32 28 28 32 37 37 47 47 39 36 33 28 28 27 22 24 26 22 30 29 32 29 37 43 44 59 34 28 19 19 19 29 29 37 59 47 41 37 27 24 24 29 24 29 39 41 39 41 40 40 41 47 37 28 17 15 15 19 29 29 33 33 21 21 17 32 27 34 39 29 19 25 14 15 21 24 24 22 27 29 28 30 30 28 28 30 34 34 41 29 25 27 26 30 28 37 39 31 31 28 28 33 34 34 24 25 32 19 16 15 19 25 23 23 14 14 14 19 20 32 32 37 37 27 20 21 12 9 9 16 15 11 9 9 8 8 8 10 10 10 24 19 11 9 12 10 10 13 23 31 20 20 12 19 19 18 18 17 22 18 15 10 10 8 10 8 8 8 12 8 9 14 12 12 10 24 12 12 12 16 22 22 25 17 19 18 11 9 12 9 9 9 11 15 20 16 16 9 9 9 10 11 11 10 12 11 10 9 8 8 8 8 10 10 17 19 16 19 17 17 8 8 8 9 8 9 9 9 8 10 8 6 6 6 6 10 12 11 10 17 11 10 12 16 21 20 23 22 25 25 34 28 19 19 17 17 11 11 11 12 13 14 10 10 9 9 11 12 18 8 8 8 8 8 8 9 9 8 8 8 8 8 8 9 15 15 32 13 10 8 8 8 8 6 6 10 10 10 9 9 8 8 8 8 8 7 7 6 8 6 6 8 8 10 11 11 13 11 12 11 11 11 8 10 6 6 8 8 9 11 11 11 11 9 11 11 9 9 8 10 8 7 6 8 8 8 8 8 8 8 8 8 6 6 6 6 6 8 8 8 9 9 7 6 6 8 6 10 10 11 15 17 8 8 6 6 6 8 6 6 6 8 8 8 9 11 11 10 8 8 6 6 8 8 10 10 12 11 11 11 9 10 8 8 8 10 9 9 9 8 8 8 8 6 6 6 8 8 9 10 8 8 9 9 8 8 10 10 10 8 10 10 10 10 10 10 10 10 9 9 9 9 10 8 8 6 6 8 12 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 12 8 8 8 8 8 8 8 8 6 6 8 6 6 10 6 8 8 8 8 6 6 6 6 8 8 10 13 8 8 6 6 6 6 8 8 8 8 8 9 8 8 6 6 10 10 13 15 19 8 10 8 8 8 8 9 8 8 10 8 8 8 8 6 6 6 8 10 8 8 8 7 11 12 11 13 10 10 10 10 10 10 10 13 11 8 6 6 6 6 8 8 9 9 6 6 6 6 7 7 9 9 9	Open. Hide. 8 8 8 8 9 11 9 10 10 3 0 0 0 0 3 6 6 6 6 6 6 6 6 6 6 6 8 6 6 6 7 9 9 18 13 8 7 9 8 12 10 16 19 20 20 24 24 24 24 19 19 12 12 19 25 28 35 37 37 37 37 35 30 36 38 38 53 53 50 50 50 50 47 47 27 23 10 10 9 9 10 10 11 10 10 10 15 13 18 19 23 37 33 36 36 38 38 53 53 53 53 53 42 38 38 38 35 35 53 35 31 31 31 29 28 25 19 17 9 12 9 12 11 10 13 13 19 19 28 37 33 33 36 36 36 36 42 50 53 50 50 50 57 57 47 53 53 53 53 50 50 50 59 54 54 59 59 59 57 57 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 59 41 35 37 35 37 40 43 57 57 57 57 57 68 68 68 68 50 50 50 50 50 57 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 50 50 50 53 53 53 53 57 57 57 57 59 59 59 59 53 50 50 47 41 40 39 39 25 25 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 3 9 3 0 3 3 0 3 3 0 3 0 3 0 0 3 10 10 6 6 6 6 6 3 0 0 0 0 3 6 6 3 0 0 0 0 3 7 3 0 0 3 6 6 6 7 6 6 9 9 9 9 9 9 3 0 3 6 6 6 6 3 0 3 6 6 6 9 9 9 9 9 9 9 3 0 3 0 0 3 7 7 9 9 9 9 9 9 9 11 18 17 9 9 9 9 13 16 19 32 28 16 13 9 6 6 6 6 8 6 9 9 3 0 0 3 7 8 8 7 7 7 7 6 6 6 6 6 6 6 8 8 6 6 9 3 0 3 9 9 9 15 13 11 10 10 14 14 20 26 19 17 17 14 16 14 14 20 16 26 11 9 7 7 7 8 12 13 8 10 11 10 10 10 6 7 10 12 8 8 8 13 12 19 24 18 16 11 9 8 8 8 8 8 8 8 8 10 6 6 8 11 10 8 10 8 8 8 10 10 8 10 11 11 11 10 8 8 8 6 7 8 10 10 10 8 8 8 8 12 8 8 9 11 12 11 11 11 16 11 10 11 13 12 12 12 11 12 10 9 9 10 10 10 10 12 15 12 8 8 8 8 8 13 9 9 9 10 8 8 8 8 10 10 16 10 9 9 18 10 7 6 6 6 8 8 10 8 8 6 6 8 8 8 8 8 10 8 8 8 8 8 8 10 8 10 10 8 8 10 10 18 24 23 14 12 11 11 11 18 18 23 10 9 10 10 10 10 13 10 9 10 13 9 6 8 6 6 8 6 10 10 10 10 9 9 9 9 12 7 7 7 10 10 10 8 8 9 9 9 8 8 8 10 13 13 10 9 8 8 8 8 8 8 7 7 10 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 10 10 15 9 8 8 8 8 8 7 6 10 8 8 8 8 9 10 10 10 10 8 8 6 6 8 10 10 8 8 8 8 8 8 8 8 8 10 13 19 17 12 12 10 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 11 11 12 8 8 6 6 8 8 8 8 8 8 8 9 8 8 8 8 10 13 13 15 13 10 10 10 10 8 9 9 9 8 8 8 8 8 8 8 8 10 8 8 8 8 10 16 10 10 12 12 8 8 6 6 8 8 9 9 14 14 9 8 8 10 8 8 8 8 9 9 9 9 10 8 8 6 7 10 8 12 12 12 15 12 16 16 10 8 8 8 8 8 10 8 8 9 10 10 8 10 10 10 10 10 15 15 17 12 10 10 10 8 9 8 8 8 8 10 10 10 7 6 8 8 8 11 15 14 11 11 8 8 6 6 8 8 9 9 12 9 10 10 10 16 22 19 11 9 9 9 9 10 8 8 8 8 8 10 10 12 10 11 11 9 8 6 6 6 6 10 8 10 11 8 8 8 8 8 8 8 6 6 6 6 10 10 8 8 8 8 8 8 8 8 8 12 12 10 10 8 8 8 8 13 13 9 9 9 9 8 6 6 6 10 10 13 8 8 8 10 10 13 13 10 13 9 9 9 10 10 8 8 8 8 11 10 8 8 6 6 8 8 11 8 8 6 6 8 8 11 18 16 16 11 9 8 8 6 6 8 8 8 6 8 8 8 8 8 6 6 8 8 8 6 6 8 8 10 9 11 13 11 8 8 8 8 6 6 7 8 10 12 12 10 10 10 10 13 11 9 9 12 8 8 8 11 14 10 10 10 11 14 10 10 10 9 9 10 10 10 8 8 10 8 8 8 8 10 10 8 8 10 10 10 12 10 10 10 10 8 8 9 8 8 8 6 6 8 3 0 3 8 8 10 11 16 16 22 19 11 11 11 9 9 10 8 8 8 12 15 9 13 12 12 10 11 9 10 8 8 8 8 8 8 8 10 10 15 11 11 11 11 9 9 11 9 8 8 6 6 6 11 10 9 9 10 8 7 7 12 11 9 9 9 8 8 6 6 8 8 8 9 9 8 10 8 8 6 6 6 7 7 10 8 10 8 8 10 8 8 8 8 9 9 9 12 16 10 9 8 7 8 8 8 10 15 10 12 10 10 12 12 8 8 8 9 9 9 9 10 12 12 8 8 8 8 6 6 8 8 10 10 8 8 7 7 11 10 9 10 10 8 8 6 6 6 6 8 8 8 10 10 10 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no305_d12.b1 MSMg01no305_d12.b1 CHROMAT_FILE:
MSMg01no305_d12.b1 PHD_FILE: MSMg01no305_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:52 2005
         (793 letters)



>mm_chr1_73228107_73229299
          Length = 1193

 Score = 1353 bits (700), Expect = 0.0
 Identities = 769/802 (95%), Gaps = 19/802 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaaccagtgttaaatacttgtggaacccttaaaaatcttaggcaacgtgtgtcttacaa 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ggaaccagtgttaaatacttgtggaacccttaagaatcttaggcaacgtgtgtcttacaa 260

                                                                       
Query: 61  atatatatctgggtacaatgaggatgaatcaatttattttactttattttatttatttta 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 atatatatctgggtacaatgaggatgaatcaatttattttattttattttatttatttta 320

                                                                       
Query: 121 ttttattttttggtcagaagggaccctacattcattatctctctcttacttccaggaggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttattttttggtcagaagggaccctacattcattatctctctcttacttccaggaggt 380

                                                                       
Query: 181 acttgcccaagggtgaggaaggcttctttgtcaccttaccccacatcaccatgacaggat 240
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 acttgcccaagggtgaggaaggcttctttgtcatcttaccccacatcaccatgacaggat 440

                                                                       
Query: 241 atgagaggcaccaaatgctgggctaagctgagacagagctcaattgctaaaagttacttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgagaggcaccaaatgctgggctaagctgagacagagctcaattgctaaaagttacttt 500

                                                                       
Query: 301 actatttattggcagagctttttctgcagaaagagtttcaggagcaatctgaagacccag 360
           ||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||
Sbjct: 501 actatttattggcagagcagtggctgcagaaagagtttcaggagcaatctgaagacccag 560

                                                                       
Query: 361 gaacagtccat------tttttttgccccgcccctgtcacagaagtggacacataccaaa 414
           |||||||||||      |      |||| | |  ||||||||||||||||||||||||  
Sbjct: 561 gaacagtccatgagaagt------gccctgtcaatgtcacagaagtggacacatacca-- 612

                                                                       
Query: 415 aattttttt---cattgcattctttctgagtttggtgagagtattgtttcttaggcaatg 471
             |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 --ttttttttttcattgcattctttctgagtttggtgagagtattgtttcttaggcaatg 670

                                                                       
Query: 472 atttcctattaatataacaacaaaaaggctaacaccttggaagctaggcatgctgagaaa 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atttcctattaatataacaacaaaaaggctaacaccttggaagctaggcatgctgagaaa 730

                                                                       
Query: 532 gcaagtgagaactcattagatggggacctacaccagccccagagaggaactcagacaatt 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gcaagtgagaactcattagatggggacctacaccagccccagagaggaactcagacaatt 790

                                                                       
Query: 592 agagactttcaaggtataggtatagactcagaaatgcatcaagtagactagacaaaaaag 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 agagactttcaaggtataggtatagactcagaaatgcatcaagtagactagacaaaaaag 850

                                                                       
Query: 652 ccactctctcctctggctgtttcctcagagcctgaattttctgacagggttcttggctaa 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ccactctctcctctggctgtttcctcagagcctgaattttctgacagggttcttggctaa 910

                                                                       
Query: 712 ttcattttacataagcctctttcttataagactgttcagtttgggtctagggttttgtgc 771
           ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 911 ttcattttatataagcctctttcttataagactgttcagtttgggtctggggttttgtgc 970

                                 
Query: 772 taccttctctctgcagtcctga 793
           ||||||||||||| ||||||||
Sbjct: 971 taccttctctctgtagtcctga 992


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 793
Length of database: 1193
Length adjustment: 10
Effective length of query: 783
Effective length of database: 1183
Effective search space:   926289
Effective search space used:   926289
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information