Query= MSMg01no305_g03.b1 MSMg01no305_g03.b1 CHROMAT_FILE:
MSMg01no305_g03.b1 PHD_FILE: MSMg01no305_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:14 2005
(357 letters)
>mm_chr1_179190171_179190927
Length = 757
Score = 650 bits (336), Expect = 0.0
Identities = 348/352 (98%)
Strand = Plus / Plus
Query: 5 gaattctcagacttatccattgatttactctttcattaattcaatacttattctatgcta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcagacttatccattgatttactctttcattaattcaatacttattctatgcta 264
Query: 65 ctttgtaccaaatctttcttttaagacagagatgctgacagtatcatttgcctgaggaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttgtaccaaatctttcttttaagacagagatgctgacagtatcatttgcctgaggaca 324
Query: 125 cccccttagaatgatgtagctcagtgataaatacttgcctagggtgcacaaggttgcagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccccttagaatgatgtagctcagtgataaatacttgcctagggtgcacaaggttgcagg 384
Query: 185 ttcaatccccagcacgccaaaacagagttgaccaaggttttgtcttgcctggagtactgc 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaatccccagcacgccaaaacagaattgaccaaggttttgtcttgcctggagtactgc 444
Query: 245 tttccaaagctggtacaggttatctctgaaagacctgtgttgtttggaaaaggcctgtaa 304
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 445 tttccaaagctggtacaggttatctctgaaagacctgtggtgactggaaaaggcctgtaa 504
Query: 305 agcaggaatcgtggacttcagtttcagtttctctgcaaccagactgtagttt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agcaggaatcgtggacttcagtttcagtttctctgcaaccagactgtagttt 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_g03.g1 MSMg01no305_g03.g1 CHROMAT_FILE:
MSMg01no305_g03.g1 PHD_FILE: MSMg01no305_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:15 2005
(379 letters)
>mm_chr1_179351976_179352754
Length = 779
Score = 650 bits (336), Expect = 0.0
Identities = 366/386 (94%), Gaps = 16/386 (4%)
Strand = Plus / Minus
Query: 1 taagggtgtgtgccgttgaatgcctcttggttgagtctattactcactaacaatcacgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 526 taagggtgtgtgccgttgaatgcctcttggttgagtctattactcactaacaatcaagaa 467
Query: 61 atcctgccctggaatggtttaccctggtagttgaacaaaatgcattgttctcgaggcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atcctgccctggaatggtttaccctggtagttgaacaaaatgcattgttctcgaggcaat 407
Query: 121 gaatgctgcttcaatacgcttatgattttgatcttaaatgtcccataaagaccactgttg 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gcatgctgcttcaatacgcttatgattttgatcttaaatgtcccataaagaccactgttg 347
Query: 181 gcagatggtagaacccttaggagatggatcccagtgggaggtttagtccctgggggagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gcagatggtagaacccttaggagatggatcccagtgggaggtttagtccctgggggagat 287
Query: 241 ggccttggaaagcattctgggatcctagtagctttccttcttgtcttcctatctttctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ggccttggaaagcattctgggatcctagtagctttccttcttgtcttcctatctttctac 227
Query: 301 cagatgcccttgtctttatgtactgttttttttt--------gggggccaagnggccgca 352
||||||||||||||||||||||||| | |||||||||| |||||||
Sbjct: 226 cagatgcccttgtctttatgtactg--------tgcagccaagggggccaagtggccgca 175
Query: 353 ggctgaaacctttgaaanaattctaa 378
||||||||||||||||| ||||||||
Sbjct: 174 ggctgaaacctttgaaataattctaa 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
