Query= MSMg01no306_o10.b1 MSMg01no306_o10.b1 CHROMAT_FILE:
MSMg01no306_o10.b1 PHD_FILE: MSMg01no306_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:49 2005
(687 letters)
>mm_chr1_22822796_22823882
Length = 1087
Score = 1237 bits (640), Expect = 0.0
Identities = 673/684 (98%), Gaps = 1/684 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctcagattgactattgtgaaaataataaaattgcctttaccaaaagttaatt 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggaattctctcagactgaatattgtgaaaataataaaattgcctttaccaaaagttaatt 628
Query: 64 ttcattaagtattaccacgccatagagccagtaaactctcaaaaccagagactgacacta 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttcattaagtattaccatgccatagagccagtaaactctcaaaaccagagactgacacta 568
Query: 124 gcataatatctataaacttattctacttttaaaggttcatgcaggaggtggaatgttctc 183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 567 gcataatatctataaacttattctatttttaaaggttcatgcaggaggtggaatgttctc 508
Query: 184 aaagtcataactcacacacagattcaagagatctcttttgattcaatattggccaaagtc 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 507 aaagtcataactcacacacagattcaagagatctattttgattcaatattggccaaagtc 448
Query: 244 aaatatagaaattacattaacacaaagtatttcatgcttccctaaattttattctctttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaatatagaaattacattaacacaaagtatttcatgcttccctaaattttattctctttt 388
Query: 304 ctatcacctcatcccagtcccctgtcaatcaaatgaaattatgccataataagtatattt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctatcacctcatcccagtcccctgtcaatcaaatgaaattatgccataataagtatattt 328
Query: 364 tattcatggaaacttgtggcgtatgattttttgggttgatctcttttcacttagtatcct 423
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tattcatggaaacttgtggtgtatgattttttgggttgatctcttttcacttagtatcct 268
Query: 424 tcttttagaaccattaaggtgttgcttaacaatatcgatacataagaatatatcaacatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcttttagaaccattaaggtgttgcttaacaatatcgatacataagaatatatcaacatt 208
Query: 484 tctctgggaacaaaacacccatagaaggagttacagagacaaaatttggagctatgacga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 207 tctctgggaacaaaacacccatagaaggagttacagagacaaaatttggagctgtgac-a 149
Query: 544 aagcatggaccatctagtgactgccatatgcagggatccatcccataatcagcttccaga 603
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 148 aaggatggaccatctagtgactgccatatgcagggatctatcccataatcagcttccaaa 89
Query: 604 tgctgacaccattgcatacactagcaagatttcgctgaaaggacccagttatagcgctct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgctgacaccattgcatacactagcaagatttcgctgaaaggacccagttatagcgctct 29
Query: 664 cttgtgagactatgccggggccta 687
||||||||||||||||||||||||
Sbjct: 28 cttgtgagactatgccggggccta 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_o10.g1 MSMg01no306_o10.g1 CHROMAT_FILE:
MSMg01no306_o10.g1 PHD_FILE: MSMg01no306_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:49 2005
(290 letters)
>mm_chr1_22757566_22758256
Length = 691
Score = 455 bits (235), Expect = e-132
Identities = 274/289 (94%), Gaps = 5/289 (1%)
Strand = Plus / Plus
Query: 1 cacttacaaggaggaacaaaatagtcttgggaggcagagaaaggcaggaccttggtggat 60
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 cacttagaaggaggaacaaaatagtcttgggaggcagaggaaggcaggaccttggtggat 264
Query: 61 gagggcaaggctagtggaatggagggggggggggacgggatcagacatggggagaggcag 120
||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 265 gagggcaaggctagtggaatggagggggggg----cgggatcaggcatggggagagacag 320
Query: 121 gagagagtcccagagggccaggagaatgaaggttttcagtgtctgttcagatatttttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagagagtcccagagggccaggagaatgaaggttttcagtgtctgttcagatatttttct 380
Query: 181 gactctcatttttatcctttaaatcact-gtgttttatagtaaaggaacactctgcaaga 239
|||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||
Sbjct: 381 gactctcatttttatcctttaaatcacttgtgttttacagtaaagggacaccctgcaaga 440
Query: 240 ttcactaacattctggagagaggcagactgatgaaagggttaaaggctc 288
|||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcaccaacattccggagagaggcagactgatgaaagggttaaaggctc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
