ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAAT
TCTCTAACCACCCTCAGTGTTGATATTAATAGTTTCATGGTAAACACAGA
GCTCTTGTGTTCACAGATAACACTTACTTGTGCCTGGCTGTGCTGGACAG
TACATTCTGTGTCATTTTCCTTCATGGGCGGAACAGTCCACAGAGCTCAC
CAACAAGTACTCCAAAACTGAGCAAGAGTTTAAGCTTCGAGATGCAACCA
GATGAGCTTCTAGAAAAGCCCATGTCTCCCATGCAGTACGCACGGTCTGG
ACTAGGGACAGCAGAGATGAATGGCAAACTCATAGCTGCAGGTAAGAGCA
GAACGCTGGGTGTGACAGACAGGCCTTATATTGATTGACTTGCAGCGAGA
GGACTCAACATGCTGCATTTCAAGACAGGAATAACATTGATATTGAATAT
CCCTAAGTTTGGTTAGAAGTCATTATTTTAATTTAAAAGGGCGTGGTGCG
CTACACCATGAACCCAGGGCCTCAGGGCTTGCTAGGCCAAGTGCTGTAGT
ACACTCATTATGTTCGACTACAGAGTAGATAAACTTGTTAGTTCTCAAGC
CAGAATAAGCAGTTTGCTCATAGATAACGAATGCTACTCCTTGACATTAG
GAACGGTCAGTTAAATACCTTTCTCGTTAGGTACACAACCTACAGACATC
CTGGCTGGACCCTGGTGACCAGCCACATAGTTTGTA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTCTGCGCCTTGTGAATTCAAGGCCTG
CCTGGACTGAGTTAAACTAGACTGTGTCCTAAAAACAAACAAACAAAAAC
CCCATACACACAGAGAATCTGTGACATTGCATGCTTATATAATCCCAGTA
TTCTGGAGGCTGAGGCAGGTTATTGTCACAAGTTCAAGGCTAGCATGTTC
TGCATATAGCAGAAGAAAAGATTCCGAGACACACAGATACAGAAAGAGAA
GTATTGGATAGAAATTCAGTGTTAAATAATAGATGATTTTATGTCTGTGC
TGGTTTGAATAAGAATGCCCTGTAGGCTCACATACTTGGTTAGTCTTGAC
TGATGAACTAGCTGTGCAAGGATTGGGGGTGTTTCCTTGTTGGAGGAGCT
GTGTTGCTTTGGATGGGCTTTACGATTTCTAAAAGCCAAGCCAGGCCCAG
TGTGTCTCTGCCTGCTGCCTGTGGATAGAATGTAGTTCTCAGCTGTTGCT
CCAGAGCTATGCCTGTCTGCTTCCTGCTGTGATGATCATGGATGAACCCT
CTGAAACTGTAAGCAAGCCTCCCAGTTAAACACTTTTATAAGAGTTGACT
TGTCATGGTGTTGCTTCATAGCAATTGAACAATAACTAAAACTGTCTCAT
AGGAAAGCCTAGCATTTTGGTTTGTATTTCATAGATGG

Query= MSMg01no307_l24.b1 MSMg01no307_l24.b1 CHROMAT_FILE:
MSMg01no307_l24.b1 PHD_FILE: MSMg01no307_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:53 2005
         (694 letters)



>mm_chr1_153206807_153207900
          Length = 1094

 Score = 1299 bits (672), Expect = 0.0
 Identities = 684/688 (99%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctctaaccaccctcagtgttgatattaatagtttcatggtaaacacagagctctt 66
           |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||
Sbjct: 207 gaattctctaaccaccctaagtgttaatattaatagttccatggtaaacacagagctctt 266

                                                                       
Query: 67  gtgttcacagataacacttacttgtgcctggctgtgctggacagtacattctgtgtcatt 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtgttcacagataacacttacttgtgcctggctgtgctggacagtacattctgtgtcatt 326

                                                                       
Query: 127 ttccttcatgggcggaacagtccacagagctcaccaacaagtactccaaaactgagcaag 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttccttcatgggcggaacagtccacagagctcaccaacaagtactccaaaactgagcaag 386

                                                                       
Query: 187 agtttaagcttcgagatgcaaccagatgagcttctagaaaagcccatgtctcccatgcag 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtttaagcttcgagatgcaaccagatgagcttctagaaaagcccatgtctcccatgcag 446

                                                                       
Query: 247 tacgcacggtctggactagggacagcagagatgaatggcaaactcatagctgcaggtaag 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tacgcacggtctggactagggacagcagagatgaatggcaaactcatagctgcaggtaag 506

                                                                       
Query: 307 agcagaacgctgggtgtgacagacaggccttatattgattgacttgcagcgagaggactc 366
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 507 agcagaacgctgggtgtgacagacaggccttatattgattgacttgcagcaagaggactc 566

                                                                       
Query: 367 aacatgctgcatttcaagacaggaataacattgatattgaatatccctaagtttggttag 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aacatgctgcatttcaagacaggaataacattgatattgaatatccctaagtttggttag 626

                                                                       
Query: 427 aagtcattattttaatttaaaagggcgtggtgcgctacaccatgaacccagggcctcagg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aagtcattattttaatttaaaagggcgtggtgcgctacaccatgaacccagggcctcagg 686

                                                                       
Query: 487 gcttgctaggccaagtgctgtagtacactcattatgttcgactacagagtagataaactt 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gcttgctaggccaagtgctgtagtacactcattatgttcgactacagagtagataaactt 746

                                                                       
Query: 547 gttagttctcaagccagaataagcagtttgctcatagataacgaatgctactccttgaca 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gttagttctcaagccagaataagcagtttgctcatagataacgaatgctactccttgaca 806

                                                                       
Query: 607 ttaggaacggtcagttaaatacctttctcgttaggtacacaacctacagacatcctggct 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttaggaacggtcagttaaatacctttctcgttaggtacacaacctacagacatcctggct 866

                                       
Query: 667 ggaccctggtgaccagccacatagtttg 694
           ||||||||||||||||||||||||||||
Sbjct: 867 ggaccctggtgaccagccacatagtttg 894


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space:   741456
Effective search space used:   741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)