Query= MSMg01no311_o16.b1 MSMg01no311_o16.b1 CHROMAT_FILE:
MSMg01no311_o16.b1 PHD_FILE: MSMg01no311_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:53 2005
(594 letters)
>mm_chr1_164038296_164039289
Length = 994
Score = 1065 bits (551), Expect = 0.0
Identities = 584/595 (98%), Gaps = 2/595 (0%)
Strand = Plus / Minus
Query: 1 aactagaaaacacatgtgcctgggcgttctcattgttactgtcagtctttgctttaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 aactagaaaacacatgtgcctgggcgttctcattgttactgtcagtctttgctttaagcc 735
Query: 61 ggttcccatatcccctggtgagcaatgttgtcatagaaacattacaaaaatgtccttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggttcccatatcccctggtgagcaatgttgtcatagaaacattacaaaaatgtccttcct 675
Query: 121 acactggtgtgctgatggtctaacacgtaccctgctagttctgatagtggattggtatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 acactggtgtgctgatggtctaacacgtaccctgctagttctgatagtggattggtatct 615
Query: 181 ggggtgtaacaaatgtggcatcttagaattcaagtttctttctccgaggtatggaatccg 240
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 614 ggggtgtaacaaatgaggcatcttagaattcaagtttctttctccgaggtacggaatccg 555
Query: 241 tatctcactttctatactacctgagtacattttaactcggaatcctggtttctctgacca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tatctcactttcta-actacctgagtacattttaactcggaatcctggtttctctgacca 496
Query: 301 gacataattctcctacattctctaagtcactcggaccaaatacatccacccccttcttga 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 495 gacataattctcctacattctctaagtcactcggaccaaatacatccaggtccttcttga 436
Query: 361 atccactcttcctcatgttccacggtcggtttctcagaactatgagctggctgtcctttg 420
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtccactcttccccatgttccacggtcggtttctcagaactatgagctggctgtcctttg 376
Query: 421 gagaccttgcttagtaatcagctttgtctttgca-cccccctccctccccattctgctcc 479
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 375 gagaccttgcttagtaatcagctttgtctttgcatcccccctccctccccattctgctcc 316
Query: 480 tctctagcagagtcctttctccattccctgctctccatggttacaatgcttttcatgcag 539
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 315 tccctagcagagtcctttctccattccctgctctccatggttacaatgcttttcgtgcag 256
Query: 540 cagtcacagagatgcttccagaatgtactggacttcatcacgccgctctctgcct 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cagtcacagagatgcttccagaatgtactggacttcatcacgccgctctctgcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_o16.g1 MSMg01no311_o16.g1 CHROMAT_FILE:
MSMg01no311_o16.g1 PHD_FILE: MSMg01no311_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:53 2005
(287 letters)
>mm_chr1_163925213_163925899
Length = 687
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Plus
Query: 4 gcctggtgatgcaccccagcaagcttgaaaaatgtgacagtgtgggtgcagcgagggcca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gcctggtgatgcaccccagcaagcttgaaaaatgtgacagtgtgggtgcagcgagggcca 263
Query: 64 aaggtgatttcaagtactacgtaacaaagcttgcaaaaggtagggaaatgtagacctatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaggtgatttcaagtactacgtaacaaagcttgcaaaaggtagggaaatgtagacctatg 323
Query: 124 ccggctgaacgaccgaaaaggactagaaatgtaaatgaattaaatcagcgtcagagggaa 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccggctgaatgaccgaaaaggactagaaatgtaaatgaattaaatcagcgtcagagggaa 383
Query: 184 agctcagtggtgggaatggagactggaacagaaactgaacacttggatggaagagccgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agctcagtggtgggaatggagactggaacagaaactgaacacttggatggaagagccgat 443
Query: 244 tgtcgttgatctctttgaccttggactagggtggtgggcgagtg 287
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtcgttgatctctttgaccttggactagggtggtgggcgagtg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
