Query= MSMg01no311_p02.b1 MSMg01no311_p02.b1 CHROMAT_FILE:
MSMg01no311_p02.b1 PHD_FILE: MSMg01no311_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:55 2005
(303 letters)
>mm_chr1_108650510_108651212
Length = 703
Score = 524 bits (271), Expect = e-153
Identities = 292/299 (97%), Gaps = 2/299 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagactgcaatgaaaagttacatgacaaactaaagaacatcttcaggctagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagactgcaatgaaaagttacatgacaaactaaagaacatcttcaggctagaaa 264
Query: 65 actctctggatactcactccaaccaggctgtgcatgagttcctacccactagctgtgacg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actctctggatactcactccaaccaggctgtgcatgagttcctacccactagctgtgacg 324
Query: 125 ccagcccaaacacggtcctgcaagttcctgtc-agctctgacaccagtccctgcccactc 183
||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 325 ccagcccaaacacggtcctgcaagttcct-tccagctctgacaccagtccccgcccactc 383
Query: 184 actcactgtcaaattctagccctgctaaaaagtcaaaagtggccttttcctaaatctgtg 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actcactgtcaaattctagccctgctaaaaagtcaaaagtggccttttcctaaatctgtt 443
Query: 244 gttctgttcatgtatggtgactttaaagtgtgtcctaccaagccataataaatatatat 302
||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||
Sbjct: 444 gttctgttcatgtatggtgaccttaaagtgtgtccaaccaagccataatatatatatat 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_p02.g1 MSMg01no311_p02.g1 CHROMAT_FILE:
MSMg01no311_p02.g1 PHD_FILE: MSMg01no311_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:55 2005
(347 letters)
>mm_chr1_108811967_108812713
Length = 747
Score = 586 bits (303), Expect = e-172
Identities = 333/343 (97%)
Strand = Plus / Minus
Query: 1 actttggagtcaggcatggtgagtacttcagaggcaaaggcagaaggatcacgacgttga 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 667 actttggagtcaggcatggtgagtacttcagaggcaaaagtagaaggatcacgacgttga 608
Query: 61 ggtcagaggatatggtaagttccaggctagcctcaactctgtagtaaggctctgactgaa 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 607 ggtcagaggatatggtaagttccaggctagccttaactctgtagtaaggctctgactgaa 548
Query: 121 acaataagttggtctgtgacatttccattgtttctgagagtcctcatggatggaatgtga 180
|||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 547 acaataagttggtctgtgacatttccattgcttctgagagtcttcatggatagaatgtga 488
Query: 181 ataatatgaaaataacgtcaatgtgaaggttgcagaaaatactattgagcataatgacaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 487 ataatatgaaaataacgtcaatgtgaaggttgcagaaaatactattgagcataatggcaa 428
Query: 241 agcccacatagtgttcagcttcctgagtgacagtgactagctcagtgcaatgtagttcag 300
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 427 agcccacatagtgttcatcttcctgagtgacagtgactagctcagtgcaatgaagttcag 368
Query: 301 cttctgcccagccaaccatcatctgaggtgggacaggcaggga 343
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 367 cttctgtccagccaaccatcatctgaggtgggacaggcaggga 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
