ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGG
AATTCATTATAATTTCCCAGGTAAATTGCCATACCCAAAATGATGAATAT
CTGAAGTACCTTTTTCCACATTATTTCCTTGTAAATGGACCATTAATGGA
AGAAGGTCTCAGTACAGAATTATCAATGGAAGACTTCAAAGTCTTTTGTT
GGGAGGATGATTAGTGACTACTTAGGTCAAAAAAATCTGTAACATTCTCT
TCCCATACATGTAGACCTTTCTCTAATATAAGCCCATGTGCCTCACAAAC
TTTATAGTATATTTTAGAGTTTTTCCACTTAGCATGTAGCTAAATATTAA
TCAGTATTATGTGGCTCATATTTTAAAACTGTGCCTCAGGGAAACACTTC
TTTATGATAAAATATGACAACCTTTCCAAGTTAAAAAACAATTAGATGAC
TAATAAAATATACAGATATGATCATAAAAATGCATTTTCAGAAGGGTAGC
TTACAGATTAGCAATGTATAGTTCTCAGGGAGACTGAGCTCTGGGAGGCA
GAACATCAGAACAGCTGGAGTATCGAGAGGTACATTACAAAAAGTGACCT
CACAGAATGAAGGTCACTATTTTAAAAGAGGTAGAGGAAGTACACAGATT
TCTAACTTAGATATCCAAAGTTAGCTTTTCTATCTAGAGAAAGGCTTTCT
TTTCCTTTAACAGGACTTCATAAGAGGACGCGAGAG

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCATGATATGGAAATAAATAAGAGG
AAGTGACAAGTGGGGCTGCAACACCCTTTAAAAAATTACTGTACAGAAAA
GGAGACAGCAGTGGAAATACCGATAACATGGATGAAATGTTTGCCTGCTA
CTCACATCATATGGAGTCAATATCCAGAATATACAATGAGCTCAAAATTA
AGCACCATAAGAACAAAACATCTAGTCAAAACCTGGGCAATATAACTGAA
GATAATTTTCAAATATTAAAAACAATAACCCAGTGAATTTACAAGGAAAA
CATTCAGCATCATTTTTAACTATCCCCCCCCCCCCCCCCATTTACATCTC
AAATGATATCTCCCTTCCTAGTCACCCCTAAAAAAAAACCCATCCCATCC
ACCCTCTCCCCATCCCCTTTGTCTCTTTGTGGGTACTCCTCCACCTATTC
ACCCACTCCTGCCTCACCCCTCTAGCATGCCCATGCACTGGGACATCAAG
CCTCCCTCTCACTAATGTCAGACATGGTCATCCTCTGCTACATGTGTATC
TGTAGTCATGGCTTCCTCCATGCATACTCTATGGTTGGTGATTTTGTCCC
TGGGAGCTCTGGGTGGTCCAATAGTTGATATTGTTCTCCCTTTTATTTTT
TTATTTATTTTTTTCTTCAAGCTCTACTTTCATGGGAN

Query= MSMg01no312_c08.b1 MSMg01no312_c08.b1 CHROMAT_FILE:
MSMg01no312_c08.b1 PHD_FILE: MSMg01no312_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:09 2005
         (674 letters)



>mm_chr1_67486555_67487628
          Length = 1074

 Score = 1245 bits (644), Expect = 0.0
 Identities = 662/668 (99%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcattataatttcccaggtaaattgccatacccaaaatgatgaatatctgaagtac 66
           |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcattataagcacccaggtaaattgccatacccaaaatgatgaatatctgaagtac 266

                                                                       
Query: 67  ctttttccacattatttccttgtaaatggaccattaatggaagaaggtctcagtacagaa 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctttttccacattatttccttgtaaatggaccattaatggaagaaggtctcagtacagaa 326

                                                                       
Query: 127 ttatcaatggaagacttcaaagtcttttgttgggaggatgattagtgactacttaggtca 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttatcaatggaagacttcaaagtcttttgttgggaggatgattagtgactacttaggtca 386

                                                                       
Query: 187 aaaaaatctgtaacattctcttcccatacatgtagacctttctctaatataagcccatgt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaaaaatctgtaacattctcttcccatacatgtagacctttctctaatataagcccatgt 446

                                                                       
Query: 247 gcctcacaaactttatagtatattttagagtttttccacttagcatgtagctaaatatta 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcctcacaaactttatagtatattttagagtttttccacttagcatgtagctaaatatta 506

                                                                       
Query: 307 atcagtattatgtggctcatattttaaaactgtgcctcagggaaacacttctttatgata 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atcagtattatgtggctcatattttaaaactgtgcctcagggaaacacttctttatgata 566

                                                                       
Query: 367 aaatatgacaacctttccaagttaaaaaacaattagatgactaataaaatatacagatat 426
           |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aaatatgagaagttttccaagttaaaaaacaattagatgactaataaaatatacagatat 626

                                                                       
Query: 427 gatcataaaaatgcattttcagaagggtagcttacagattagcaatgtatagttctcagg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatcataaaaatgcattttcagaagggtagcttacagattagcaatgtatagttctcagg 686

                                                                       
Query: 487 gagactgagctctgggaggcagaacatcagaacagctggagtatcgagaggtacattaca 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gagactgagctctgggaggcagaacatcagaacagctggagtatcgagaggtacattaca 746

                                                                       
Query: 547 aaaagtgacctcacagaatgaaggtcactattttaaaagaggtagaggaagtacacagat 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aaaagtgacctcacagaatgaaggtcactattttaaaagaggtagaggaagtacacagat 806

                                                                       
Query: 607 ttctaacttagatatccaaagttagcttttctatctagagaaaggctttcttttccttta 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttctaacttagatatccaaagttagcttttctatctagagaaaggctttcttttccttta 866

                   
Query: 667 acaggact 674
           ||||||||
Sbjct: 867 acaggact 874


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space:   706496
Effective search space used:   706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)