Query= MSMg01no312_i09.b1 MSMg01no312_i09.b1 CHROMAT_FILE:
MSMg01no312_i09.b1 PHD_FILE: MSMg01no312_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:37 2005
(688 letters)
>mm_chr1_14836756_14837843
Length = 1088
Score = 1284 bits (664), Expect = 0.0
Identities = 679/684 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccttagttttgcatcttgaggcatgagccaccatgaaccaccatgactatcct 64
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcatcttagttttgcatcttgaggcatgagccaccatgaaccaccataactatcct 264
Query: 65 acatcatcaaggcatggctgtcctcagattgcccatacatgcttgatcccatatgatttc 124
|||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 acatcaccaaggtatggctgtcctcagattgcccatacatgcttgatccaatatgatttc 324
Query: 125 caaagacaaaagagaataatgggctttccccaccctcatagatgaagctctgatgtcatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaagacaaaagagaataatgggctttccccaccctcatagatgaagctctgatgtcatg 384
Query: 185 gaatacattggctttgaggaggtggattttgatattgagtgtgtgttttcccttcaaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaatacattggctttgaggaggtggattttgatattgagtgtgtgttttcccttcaaaaa 444
Query: 245 catcacatggcacttgttccttgtgaggcatgacccaatcactgctaggacagtagacca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catcacatggcacttgttccttgtgaggcatgacccaatcactgctaggacagtagacca 504
Query: 305 cttgtcttgctcttttaagaacctagtgcttctgttttagcattgctgtattagtaacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttgtcttgctcttttaagaacctagtgcttctgttttagcattgctgtattagtaacat 564
Query: 365 caatttgattaaacatttccaccaggaatgctactgtgagaggagatgtgactaagcttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caatttgattaaacatttccaccaggaatgctactgtgagaggagatgtgactaagcttt 624
Query: 425 ccttaatttattttgagtttcacatgagcaaatgtcatgtaaccctcataacaaaaagct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccttaatttattttgagtttcacatgagcaaatgtcatgtaaccctcataacaaaaagct 684
Query: 485 ccatgcactgtagtattataatccagtttctaattctggggtgaaaagatattttaggta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccatgcactgtagtattataatccagtttctaattctggggtgaaaagatattttaggta 744
Query: 545 gaaaagaatcatagggaaaggaatgggactttgtgggtgaaattagggacagatgagtac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaaaagaatcatagggaaaggaatgggactttgtgggtgaaattagggacagatgagtac 804
Query: 605 tcaagtgcctcagagaaatgtatgtgctgggtgtagtgatcatgggtcttcaccttccct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcaagtgcctcagagaaatgtatgtgctgggtgtagtgatcatgggtcttcaccttccct 864
Query: 665 gctcttccaccctctgactacccc 688
||||||||||||||||||||||||
Sbjct: 865 gctcttccaccctctgactacccc 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_i09.g1 MSMg01no312_i09.g1 CHROMAT_FILE:
MSMg01no312_i09.g1 PHD_FILE: MSMg01no312_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:37 2005
(663 letters)
>mm_chr1_14891463_14892525
Length = 1063
Score = 306 bits (158), Expect = 5e-87
Identities = 179/186 (96%), Gaps = 1/186 (0%)
Strand = Plus / Minus
Query: 1 tttgattcagttaattttgacatccagtggcttctcctaacatacttttagaattttaat 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 tttgattgagttaattttgacatccagtggcttctcctaacatacttttagaattttaat 940
Query: 61 atggctaagaagcaattatgttaagaaaatcgagcctctgtgttgttttt-agtgaactt 119
||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||
Sbjct: 939 atggctaagaagcaattatgttaggaaaatcgggcctccatgttgttttttagtgaactt 880
Query: 120 tctctgacactcaaaaggatgttctgaaatttatgtatatacaaaagtcgagagtagttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 tctctgacactcaaaaggatgttctgaaatttatgtatatacaaaagtcgagagtagttg 820
Query: 180 agggcc 185
| ||||
Sbjct: 819 acggcc 814
Score = 265 bits (137), Expect = 8e-75
Identities = 158/165 (95%)
Strand = Plus / Minus
Query: 499 gcccaccagttctccattataggcagatgttgctactcacttcagaatgatgattttata 558
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gcccaccagttctccattaaaggcagatgttgctactcacttcagaatgatgattttata 757
Query: 559 ggaaaaagtgggctcattcaaacatgacaaagcgattttgtgttgtattttatttttctt 618
||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||| |
Sbjct: 756 ggaaagagtgggcttattcaaacatgacaaagtgattttgtgttgtattgtatttttcct 697
Query: 619 gactttttattatatttaaaaatatcctactcagagcctgaattc 663
|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gattttttattatatttaaaaatatcctactcagagcctgaattc 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
