MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-313B09
Chromosome	1 (Build37)
Map Location	66,142,519 - 66,298,459
singlet/doublet	doublet
Overlap gene	Mtap2
Upstream gene	Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775, Crygf, LOC667781, EG667786
Downstream gene	C030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-313B09.T7 (MSMg01no313_b09.b1)	MSMg01-313B09.TJ (MSMg01no313_b09.g1)
ACC	AG435118	AG435119
length	1,277	1,262
length of high quality (start - end)	638 (136 - 773)	430 (496 - 925)
definition	CHROMAT_FILE: MSMg01no313_b09.b1 PHD_FILE: MSMg01no313_b09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:54:23 2005	CHROMAT_FILE: MSMg01no313_b09.g1 PHD_FILE: MSMg01no313_b09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:54:23 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(66,142,519 - 66,143,156)	(66,298,032 - 66,298,459)
sequence	CGAATTTNNNNNNNGATCACTGGGCGCTATAGACTCCTATAGGGAGAGGA TCCGCGGAATTCCAGTAAAAATTAGGAGCATTATCAAGCCATCACGTCAA AGATGTAAGAAACATTTTTACTTATGTACAATATCTTATCAATTACATTA ACATTAGCTTTTCCTCCAGTGTTGACTTCTGAAAATGGAAAATTCACAAA TCCATGTCAGCCATTTTTGGTCCTCTAACTTCTATTATTCAGTAGTAAAC TTTAAAAATCAAGCAGGTAGAATTTGTATTACTCTTTTTCCATTTTCCAA CTTTGTGAGAACAATTTAATAACATTTACTTTTGCCAAAGTTGTGTATGA AGGGAGGAGAGGAGAAATGAACAGAGAAAGTAGCTGGTGAATCAATCAGA CCTAGCAATATAGGCTTTCTATACTTCTATTTTCTGTGGACTCTTAGTAA CCATGGCAATGATGCTACCTACCAACTCATAGCACATGGAAACCATCAAT GAAAAGCTTATGTACAGATATGATTGAATAGGGATAAGTGAAATGGAGGA TAAAACTTGTTCATAAAAGGGGAGGTGAGTCATTGTTGGTGAACAGCCCC TTCCTCTAACATAGTAATAACCTTCTACTTGACTGGTCTGCTGAGGAATT CTCTCATGTGCTGGCTTAACACAGTATGAAACTCCAAGTCTTTCTGTTAC CATTCCTTTATATTATGATTTTTAAATAACAGTTCACTGCAGTCCTCACC ATTTTGCAATGATTACAAAACTTGGGTGGCACTATAGCACCACCCAGCAG TCATTGAACATAGTATATTCTTATTGCTCTGACAAGATATCTGACAGAAG TAAACTAAAGGAGGGAGGGTTTATTTGGGTCACAGTTTGAATGGCATACC CATCCTAACAAGAAAGGCCAAGCAAAAGTCATGCCATTTGAAAAATGTTG TAAAAACTCTTCACATGAAACTGTCCATAAAGTTAAGTTTTGAAAAAATT ATTCCTGGGTAACACCTTTCAAAATCCCTTTTTCTGAACCCCACTCCCCC CGTTAATTTCCCTCTTTATCATTTTTTTCCCAGCTCTCCCTCGTGTAGAA ACCCTTCTTATCACATAACCATCGTGTCTCTTTTCATATATAATCCAATC ACGTTCCTTTAATATATTTTCCTAAAAAAAACCTTCCTCTCTCCTATTTA TCTACTAAATCCAACACTACTACTCTCCTTCGTTACCTTAACTTGACAGC CTTCTACGTTGTAATACTTTCTCACAA	NNNCCAGAGAGTGTAGCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXCTGTCCTACAGAAGAAAATAGAGGGGTAAA TAGATTCCCAAGCCCATCTGTGTGAGGGACCTCTAAGGCTCTGTTATTAC TCCAACCTCAGATGAAGCTGTTTAGAGCGCCTCCTAAAAGCCAGCTAATG AGAAAACAGAACAAAGAAAGGACATCTTAGCATTCTGCTCGTTAATTAAC ACGAGTGATTCACAAATGCACTTTCAACTCTGCTCTCCTTACATAATGTG TTCTGTTTGAGGAACAAATTGTGGAACTAAATGTGTTTTCCTGTTCAGAA AGTAAACCATCCTTTAAAGTATAAGCCAGCCTTTGTTTATCTTTTAAGGA ACGAAAATGAGGGCACATTTATTTCACCAAAACTTAGCTAGTGAGGTGTT TTTTTTAAAACCTTCAATAACCAAAGTAATGTAAAACACATAATGGGGAG AACAATGGTGGTTATTAGTGAGCCATGGTGTGATGTATACAGTTCATGCT TGATCCTGCTCTTGCTCACACTCTGGGCAGAATATCCTGAACCAGCAAGC TAAAGACTCAAAAAGCCCTTACAAAAGCTTATTTAAGCTAGTTCACAATC AATATAAGCACAGCACTGACCTTAATTCTTGCCAGCAGTCACAATATAGG TTGGTTCAGATCAATATAAATCTAAAAGGAAAAGAAAAAAAAATAACACC ATTAGATTAAATCAGTCAGGTAAGTCAGCCTTTCTTTGTCTAAGAAGGAA AGCCAAGGCAGGCGTTAAACAACTTGTTTATTGTGCCCTAAAATGTACTG GCTGACACAGATCGCTTTACAACACACCATGCTTGTGTAGAAGTAACTTG TAAATTCACAGTAAATTTTAGGTTTCATTTTAAAACGTGTAATAAATGTC AAAATTAGTTCCGATTTTTGCTTTCGCATTTTATGCATTCAAAGAATTCC TAAGCATATAGCCAAAAACATCCACCTTCCAACTGTAAAAAACCCCCCTT TGCCCTGGAAAATTTTCTTAAAAATTAAATTAACTCCTTTGGACCCCGGC GGATTTTTTTCCCCACCNGGAGGAAATGGGAGGGGGCCTCGAAACACCTT TGTGATTTTATGGAAAATTCCTAAAAAAGCCCCCTAAAACCAGGGTCCTT ATAAAATATACAAATAAAAATCCTTTTTTTCTCTTTTCCCGAAAGAAGAC AAGGTACTACCC
quality values	Open. 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Alignment Information

BAC End 1	BAC End 2
Query= MSMg01no313_b09.b1 MSMg01no313_b09.b1 CHROMAT_FILE: MSMg01no313_b09.b1 PHD_FILE: MSMg01no313_b09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:54:23 2005 (638 letters) >mm_chr1_66142319_66143356 Length = 1038 Score = 1226 bits (634), Expect = 0.0 Identities = 637/638 (99%) Strand = Plus / Plus Query: 1 ttatcaattacattaacattagcttttcctccagtgttgacttctgaaaatggaaaattc 60 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 201 ttatcaattacattaacattagcttttcctccagtgttgacttctgaaaatggaaaattc 260 Query: 61 acaaatccatgtcagccatttttggtcctctaacttctattattcagtagtaaactttaa 120 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 261 acaaatccatgtcagccatttttggtcctctaacttctattattcagtagtaaactttaa 320 Query: 121 aaatcaagcaggtagaatttgtattactctttttccattttccaactttgtgagaacaat 180 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 321 aaatcaagcaggtagaatttgtattactctttttccattttccaactttgtgagaacaat 380 Query: 181 ttaataacatttacttttgccaaagttgtgtatgaagggaggagaggagaaatgaacaga 240 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 381 ttaataacatttacttttgccaaagttgtgtatgaagggaggagaggagaaatgaacaga 440 Query: 241 gaaagtagctggtgaatcaatcagacctagcaatataggctttctatacttctattttct 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 441 gaaagtagctggtgaatcaatcagacctagcaatagaggctttctatacttctattttct 500 Query: 301 gtggactcttagtaaccatggcaatgatgctacctaccaactcatagcacatggaaacca 360 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 501 gtggactcttagtaaccatggcaatgatgctacctaccaactcatagcacatggaaacca 560 Query: 361 tcaatgaaaagcttatgtacagatatgattgaatagggataagtgaaatggaggataaaa 420 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 561 tcaatgaaaagcttatgtacagatatgattgaatagggataagtgaaatggaggataaaa 620 Query: 421 cttgttcataaaaggggaggtgagtcattgttggtgaacagccccttcctctaacatagt 480 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 621 cttgttcataaaaggggaggtgagtcattgttggtgaacagccccttcctctaacatagt 680 Query: 481 aataaccttctacttgactggtctgctgaggaattctctcatgtgctggcttaacacagt 540 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 681 aataaccttctacttgactggtctgctgaggaattctctcatgtgctggcttaacacagt 740 Query: 541 atgaaactccaagtctttctgttaccattcctttatattatgatttttaaataacagttc 600 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 741 atgaaactccaagtctttctgttaccattcctttatattatgatttttaaataacagttc 800 Query: 601 actgcagtcctcaccattttgcaatgattacaaaactt 638 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 801 actgcagtcctcaccattttgcaatgattacaaaactt 838 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.34 0.600 1.10 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 2, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 32 Number of extensions: 1 Number of successful extensions: 1 Number of sequences better than 10.0: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 638 Length of database: 1038 Length adjustment: 10 Effective length of query: 628 Effective length of database: 1028 Effective search space: 645584 Effective search space used: 645584 X1: 8 (15.9 bits) X2: 517 (999.5 bits) X3: 517 (999.5 bits) S1: 8 (16.4 bits) S2: 8 (16.2 bits)	Query= MSMg01no313_b09.g1 MSMg01no313_b09.g1 CHROMAT_FILE: MSMg01no313_b09.g1 PHD_FILE: MSMg01no313_b09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:54:23 2005 (430 letters) >mm_chr1_66297830_66298659 Length = 830 Score = 828 bits (428), Expect = 0.0 Identities = 428/428 (100%) Strand = Plus / Minus Query: 3 gagaacaatggtggttattagtgagccatggtgtgatgtatacagttcatgcttgatcct 62 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 630 gagaacaatggtggttattagtgagccatggtgtgatgtatacagttcatgcttgatcct 571 Query: 63 gctcttgctcacactctgggcagaatatcctgaaccagcaagctaaagactcaaaaagcc 122 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 570 gctcttgctcacactctgggcagaatatcctgaaccagcaagctaaagactcaaaaagcc 511 Query: 123 cttacaaaagcttatttaagctagttcacaatcaatataagcacagcactgaccttaatt 182 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 510 cttacaaaagcttatttaagctagttcacaatcaatataagcacagcactgaccttaatt 451 Query: 183 cttgccagcagtcacaatataggttggttcagatcaatataaatctaaaaggaaaagaaa 242 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 450 cttgccagcagtcacaatataggttggttcagatcaatataaatctaaaaggaaaagaaa 391 Query: 243 aaaaaataacaccattagattaaatcagtcaggtaagtcagcctttctttgtctaagaag 302 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 390 aaaaaataacaccattagattaaatcagtcaggtaagtcagcctttctttgtctaagaag 331 Query: 303 gaaagccaaggcaggcgttaaacaacttgtttattgtgccctaaaatgtactggctgaca 362 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 330 gaaagccaaggcaggcgttaaacaacttgtttattgtgccctaaaatgtactggctgaca 271 Query: 363 cagatcgctttacaacacaccatgcttgtgtagaagtaacttgtaaattcacagtaaatt 422 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| Sbjct: 270 cagatcgctttacaacacaccatgcttgtgtagaagtaacttgtaaattcacagtaaatt 211 Query: 423 ttaggttt 430 \|\|\|\|\|\|\|\| Sbjct: 210 ttaggttt 203 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.34 0.600 1.10 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 2, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 20 Number of extensions: 1 Number of successful extensions: 1 Number of sequences better than 10.0: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 430 Length of database: 830 Length adjustment: 9 Effective length of query: 421 Effective length of database: 821 Effective search space: 345641 Effective search space used: 345641 X1: 8 (15.9 bits) X2: 517 (999.5 bits) X3: 517 (999.5 bits) S1: 8 (16.4 bits) S2: 8 (16.2 bits)

BAC End 1

BAC End 2

Query= MSMg01no313_b09.b1 MSMg01no313_b09.b1 CHROMAT_FILE:
MSMg01no313_b09.b1 PHD_FILE: MSMg01no313_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:23 2005
         (638 letters)



>mm_chr1_66142319_66143356
          Length = 1038

 Score = 1226 bits (634), Expect = 0.0
 Identities = 637/638 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttatcaattacattaacattagcttttcctccagtgttgacttctgaaaatggaaaattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatcaattacattaacattagcttttcctccagtgttgacttctgaaaatggaaaattc 260

                                                                       
Query: 61  acaaatccatgtcagccatttttggtcctctaacttctattattcagtagtaaactttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaatccatgtcagccatttttggtcctctaacttctattattcagtagtaaactttaa 320

                                                                       
Query: 121 aaatcaagcaggtagaatttgtattactctttttccattttccaactttgtgagaacaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatcaagcaggtagaatttgtattactctttttccattttccaactttgtgagaacaat 380

                                                                       
Query: 181 ttaataacatttacttttgccaaagttgtgtatgaagggaggagaggagaaatgaacaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaataacatttacttttgccaaagttgtgtatgaagggaggagaggagaaatgaacaga 440

                                                                       
Query: 241 gaaagtagctggtgaatcaatcagacctagcaatataggctttctatacttctattttct 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 gaaagtagctggtgaatcaatcagacctagcaatagaggctttctatacttctattttct 500

                                                                       
Query: 301 gtggactcttagtaaccatggcaatgatgctacctaccaactcatagcacatggaaacca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggactcttagtaaccatggcaatgatgctacctaccaactcatagcacatggaaacca 560

                                                                       
Query: 361 tcaatgaaaagcttatgtacagatatgattgaatagggataagtgaaatggaggataaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaatgaaaagcttatgtacagatatgattgaatagggataagtgaaatggaggataaaa 620

                                                                       
Query: 421 cttgttcataaaaggggaggtgagtcattgttggtgaacagccccttcctctaacatagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgttcataaaaggggaggtgagtcattgttggtgaacagccccttcctctaacatagt 680

                                                                       
Query: 481 aataaccttctacttgactggtctgctgaggaattctctcatgtgctggcttaacacagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aataaccttctacttgactggtctgctgaggaattctctcatgtgctggcttaacacagt 740

                                                                       
Query: 541 atgaaactccaagtctttctgttaccattcctttatattatgatttttaaataacagttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaaactccaagtctttctgttaccattcctttatattatgatttttaaataacagttc 800

                                                 
Query: 601 actgcagtcctcaccattttgcaatgattacaaaactt 638
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actgcagtcctcaccattttgcaatgattacaaaactt 838


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no313_b09.g1 MSMg01no313_b09.g1 CHROMAT_FILE:
MSMg01no313_b09.g1 PHD_FILE: MSMg01no313_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:23 2005
         (430 letters)



>mm_chr1_66297830_66298659
          Length = 830

 Score =  828 bits (428), Expect = 0.0
 Identities = 428/428 (100%)
 Strand = Plus / Minus

                                                                       
Query: 3   gagaacaatggtggttattagtgagccatggtgtgatgtatacagttcatgcttgatcct 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gagaacaatggtggttattagtgagccatggtgtgatgtatacagttcatgcttgatcct 571

                                                                       
Query: 63  gctcttgctcacactctgggcagaatatcctgaaccagcaagctaaagactcaaaaagcc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gctcttgctcacactctgggcagaatatcctgaaccagcaagctaaagactcaaaaagcc 511

                                                                       
Query: 123 cttacaaaagcttatttaagctagttcacaatcaatataagcacagcactgaccttaatt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cttacaaaagcttatttaagctagttcacaatcaatataagcacagcactgaccttaatt 451

                                                                       
Query: 183 cttgccagcagtcacaatataggttggttcagatcaatataaatctaaaaggaaaagaaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cttgccagcagtcacaatataggttggttcagatcaatataaatctaaaaggaaaagaaa 391

                                                                       
Query: 243 aaaaaataacaccattagattaaatcagtcaggtaagtcagcctttctttgtctaagaag 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aaaaaataacaccattagattaaatcagtcaggtaagtcagcctttctttgtctaagaag 331

                                                                       
Query: 303 gaaagccaaggcaggcgttaaacaacttgtttattgtgccctaaaatgtactggctgaca 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaaagccaaggcaggcgttaaacaacttgtttattgtgccctaaaatgtactggctgaca 271

                                                                       
Query: 363 cagatcgctttacaacacaccatgcttgtgtagaagtaacttgtaaattcacagtaaatt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cagatcgctttacaacacaccatgcttgtgtagaagtaacttgtaaattcacagtaaatt 211

                   
Query: 423 ttaggttt 430
           ||||||||
Sbjct: 210 ttaggttt 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space:   345641
Effective search space used:   345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

no map image available.

BAC End Information

Alignment Information