Query= MSMg01no313_e10.b1 MSMg01no313_e10.b1 CHROMAT_FILE:
MSMg01no313_e10.b1 PHD_FILE: MSMg01no313_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:47 2005
(683 letters)
>mm_chr1_168749110_168750193
Length = 1084
Score = 1189 bits (615), Expect = 0.0
Identities = 662/679 (97%), Gaps = 5/679 (0%)
Strand = Plus / Plus
Query: 8 cccttcactactaaatctacaaaatcatttccttagctggacctttttctagcttttcta 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cccttcactactaaatctacaaaatcatttccttagctggacctttttctagcttttcta 267
Query: 68 gtctgttttatggtctgtttgtccactcagatacccacatcccactgttttcattactga 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtctgttttatggtctgtttgtccactcagatacccacatcccactgttttcattactga 327
Query: 128 agttgtagaataccattgctcttgagaaaaggctaatttgccctcactaatgtttgtcct 187
|||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 328 agttgtagaacgccattgctcttgagaagaggctaatttgccctcactaatgtttgtcct 387
Query: 188 cagaaacgcccttggtcgctccaatttgtctaagtttccgtgtgaacttcagaaccagct 247
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 388 cagaaacgcccttggtcgctccagtttgtctaagtttccgtgtgaacttcagaaccagct 447
Query: 248 ttcttggtttgtggacaactggatta--ttttaacaaactaaagaaagttggcgtctttg 305
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 448 ttcttggtttgtggacaactggattaaattt--acaaactaaagaaagttggcgtctttg 505
Query: 306 tgacttttcttcttcctcagagtacggcatatc-cttgcatctgctgggctccagtcttg 364
|||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 506 tgacttttattcttcctcagagcacggcatattacttgcatctgctgggctccagtcttg 565
Query: 365 tgtggcttgcgtcatttctgatctcacaccaagtgctgtacaaaggccaggagatgacgg 424
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 566 tgtggcttgcgtcatttctgatctcacaccaactgctgtacaaaggccaggagatgacgg 625
Query: 425 atagcaagttagagtgacaaacaggaaacagatttgtctgtgcaaaagtcaaggggcttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atagcaagttagagtgacaaacaggaaacagatttgtctgtgcaaaagtcaaggggcttc 685
Query: 485 tgtattctggccgcacaggaagagttaagattataccccgaaggaaaaaggaggagaaaa 544
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgtattctggccgcacaggaagggttaagattataccccgaaggaaaaaggaggagaaaa 745
Query: 545 acattgtctcggcttgatgcttcctgttggctatttcagtccattctcgctttacagatc 604
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 acattgtctcagcttgatgcttcctgttggctatttcagtccattctcgctttacagatc 805
Query: 605 ataacaaggccatgagaaagtctgcccttgggattaatttacccagaactgcaaaccacg 664
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ataacaaggccatgagaaagaatgcccttgggattaatttacccagaactgcaaaccacg 865
Query: 665 ggttaccatatgcctcaca 683
|||||||||||||||||||
Sbjct: 866 ggttaccatatgcctcaca 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space: 722802
Effective search space used: 722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_e10.g1 MSMg01no313_e10.g1 CHROMAT_FILE:
MSMg01no313_e10.g1 PHD_FILE: MSMg01no313_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:47 2005
(263 letters)
>mm_chr1_168947704_168948366
Length = 663
Score = 408 bits (211), Expect = e-118
Identities = 229/235 (97%)
Strand = Plus / Minus
Query: 1 tagaccttcaactttaacaacagtggatcttcagcactgtgctctaccccctgggaaacc 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 422 tagaccttcaactttaacaacagtggatcttcagcactgtgctctacctactgggaaacc 363
Query: 61 tctgagggatacacaggatgctatgaggggttcagagagctgaacacttaaggaactcaa 120
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 362 tctgagggatacacaggatgctatgaggggtccagagagctgaacacctaaggaactcaa 303
Query: 121 tgctttgacatatttcatagtgtttggcttgtgtaaagtttcaacctgggaagagtgttt 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 302 tgctttgacatatttcatagtgtttggcttgtgtaaagtttcaatctgggaagagtgttt 243
Query: 181 gcagtggttttgtttgaaatgttccaactgtttgtggtttacgtttttttttttt 235
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 242 gcagtggttttgtttgaaatgttccaactgtttgtggtttacctttttttttttt 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
