Query= MSMg01no313_i06.b1 MSMg01no313_i06.b1 CHROMAT_FILE:
MSMg01no313_i06.b1 PHD_FILE: MSMg01no313_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:17 2005
(774 letters)
>mm_chr1_179095238_179096411
Length = 1174
Score = 783 bits (405), Expect = 0.0
Identities = 435/445 (97%), Gaps = 4/445 (0%)
Strand = Plus / Minus
Query: 16 gaatt-aagaaaactcctaagcca-atatatatcttgacagttggtggacagatgctcct 73
||||| |||||||||||||||| | | || ||||||||||||||||||||||||||||||
Sbjct: 443 gaattcaagaaaactcctaagctagacat-tatcttgacagttggtggacagatgctcct 385
Query: 74 tattcgtttgtgagactgagcgtattcaaaaagcacttcaaaacactcctatgccagcca 133
|||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatttgagtgtgagactgag-gtattcaaaaagcacttcaaaacactcctatgccagcca 326
Query: 134 acattattttccctatattaggatttttaagctactgtgtaatagtaattattgataaag 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acattattttccctatattaggatttttaagctactgtgtaatagtaattattgataaag 266
Query: 194 cacctagttatagctggataaattatttagggcatttttttgtgtgtatgtctttttttt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacctagttatagctggataaattatttagggcatttttttgtgtgtatgtctttttttt 206
Query: 254 tattacaaattttctttatttacatttcaaatgtcatttccttccctagtttcccctctg 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tattacaaattttctttatttacatttcaaatgtcatttccttccctagtttcccctctg 146
Query: 314 aaaaaccctgtcccttccccccaaccccatgctcaccaacccacccagtcccacttcctg 373
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 145 aaaaaccctgtcccttccccccaaccccttgctcaccaacccacccagtcccacttcctg 86
Query: 374 aaccttcacaggaccaagggcctctcctcccattgatgagagactaggccatcctctgct 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aaccttcacaggaccaagggcctctcctcccattgatgagagactaggccatcctctgct 26
Query: 434 acatatgcagctggagctatgagtc 458
|||||||||||||||||||||||||
Sbjct: 25 acatatgcagctggagctatgagtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 774
Length of database: 1174
Length adjustment: 10
Effective length of query: 764
Effective length of database: 1164
Effective search space: 889296
Effective search space used: 889296
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no313_i06.g1 MSMg01no313_i06.g1 CHROMAT_FILE:
MSMg01no313_i06.g1 PHD_FILE: MSMg01no313_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:18 2005
(330 letters)
>mm_chr1_178931140_178931869
Length = 730
Score = 615 bits (318), Expect = e-180
Identities = 327/330 (99%)
Strand = Plus / Plus
Query: 1 cagatccctaaaggtactggggctcagcctggcaggtagctctaaccctctgagaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cagatccctaaaggtactggggctcagcctggcaggtagctctaaccgtctgagaaagtg 260
Query: 61 acaaaggagggatgcgcgcccatccctcgatgctctaaagtctctggtggaagcactgtt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaaggagggatgtgcgcccatccctcgatgctctaaagtctctggtggaagcactgtt 320
Query: 121 ttaggcaggaactccgtggtggagttcagtggcactgttggacgcttaggggacttgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaggcaggaactccgtggtggagttcagtggcactgttggacgcttaggggacttgtgg 380
Query: 181 agtggcagggcacattcaggatgcctgaatacctcccctggtggtgtgctgcttagcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggcagggcacattcaggatgcctgaatacctcccctggtggtgtgctgcttagcagg 440
Query: 241 tgaccgaggaaggctcagtgaagccaccttagcaagcatcctgagagtagtatcgtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 tgaccgaggaaggctcagtgaagccaccttagcaagcatcctgagagcagtatcgtgttt 500
Query: 301 gcagcttccttccacctcccacccccactg 330
||||||||||||||||||||||||||||||
Sbjct: 501 gcagcttccttccacctcccacccccactg 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
