Query= MSMg01no315_g10.b1 MSMg01no315_g10.b1 CHROMAT_FILE:
MSMg01no315_g10.b1 PHD_FILE: MSMg01no315_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:51 2005
(370 letters)
>mm_chr1_74434989_74435758
Length = 770
Score = 687 bits (355), Expect = 0.0
Identities = 364/367 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagccaatctctctgacttaccaaggcccaagatcagggataaggttggccatt 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagccaacctgtctgacttaccaaggcccaagatcagggataaggttggccatt 263
Query: 64 tccagccaggggccggcacttagtgctcctccatccccgtggcggccctaaagacctcag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tccagccaggggccggcacttagtgctcctccatccccgtggcggccctaaagacctcag 323
Query: 124 ccccaaaactcaaattgaatttaaggaaagaggcctaccttagggtttcaccagtcagtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccaaaactcaaattgaatttaaggaaagaggcctaccttagggtttcaccagtcagtc 383
Query: 184 ctcgcatacctgcttccggggagccagctgagggcgtcctaccagacctcccgtccagtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcgcatacctgcttccggggagccagctgagggcgtcctaccagacctcccgtccagtc 443
Query: 244 cgtccacaagcaggaaactgaggtggtgaagggaaggacccttgtctcaggtgccccaga 303
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catccacaagcaggaaactgaggtggtgaagggaaggacccttgtctcaggtgccccaga 503
Query: 304 gtatcctgcttagtcccggatagcagtccacaccattgtttttcttggggatgagtatta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtatcctgcttagtcccggatagcagtccacaccattgtttttcttggggatgagtatta 563
Query: 364 aaataat 370
|||||||
Sbjct: 564 aaataat 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_g10.g1 MSMg01no315_g10.g1 CHROMAT_FILE:
MSMg01no315_g10.g1 PHD_FILE: MSMg01no315_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:51 2005
(279 letters)
>mm_chr1_74600652_74601331
Length = 680
Score = 534 bits (276), Expect = e-156
Identities = 279/280 (99%), Gaps = 1/280 (0%)
Strand = Plus / Minus
Query: 1 gatgtttccatccttcgagcagaggtacttgaggaagccatccttgctcagcacatgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gatgtttccatccttcgagcagaggtacttgaggaagccatccttgctcagcacatgcag 421
Query: 61 caatcggcctatggtgtggaagggtaaccatgagagtgagaagctctatctaagtgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caatcggcctatggtgtggaagggtaaccatgagagtgagaagctctatctaagtgagag 361
Query: 121 ggccgacacacccacaagcctgttcaccagccccca-cccttgggatcctgccccttaga 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 360 ggccgacacacccacaagcctgttcaccagcccccatcccttgggatcctgccccttaga 301
Query: 180 tgcctattcccagtcagcagatctcaaatgtgccacttattgtatctgccatttaaaatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgcctattcccagtcagcagatctcaaatgtgccacttattgtatctgccatttaaaatg 241
Query: 240 ttccttctttgattggtggctcacagtctctgcaaaggag 279
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttccttctttgattggtggctcacagtctctgcaaaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 680
Length adjustment: 9
Effective length of query: 270
Effective length of database: 671
Effective search space: 181170
Effective search space used: 181170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
