Query= MSMg01no315_i18.b1 MSMg01no315_i18.b1 CHROMAT_FILE:
MSMg01no315_i18.b1 PHD_FILE: MSMg01no315_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:03 2005
(344 letters)
>mm_chr1_75015060_75015802
Length = 743
Score = 563 bits (291), Expect = e-165
Identities = 334/355 (94%), Gaps = 12/355 (3%)
Strand = Plus / Minus
Query: 1 gagagatggcagcgtggcctttcagaggaaagcatgcaggaagcctctgccctggcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 636 gagagatggcagcgtggcctttcagaggaaagcatgcaggaagcctctgggctggcagtg 577
Query: 61 gcagcaggctttcaaatgga-----------gaatgatactacttcatgcagatttgttt 109
|||||||||||||||||| | | ||||||||| ||||| |||||||||||
Sbjct: 576 gcagcaggctttcaaatgaaggccctgtgttggatgatactaattcatccagatttgttt 517
Query: 110 gtggttgatggcaaggcctgtcagtgggatatcagctttcttttctctacatctccaggc 169
|||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 516 gtggttaatggc-aggcctgtcagtgggatatcaactttcttttctctacatctccaggc 458
Query: 170 agaccaatgacagtgtcctctttcctgtagaaattgccagaggcgtgtgctgttggtgat 229
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agaccaatgacagtgttctctttcctgtagaaattgccagaggcgtgtgctgttggtgat 398
Query: 230 ggaaagccatttgccatgagtctgcagagtctgtatgtggcagttacaaaacagcagatc 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggaaagccatttgccatgagtctgcagagtctgtatgtggcagttacaaaacagcagatc 338
Query: 290 caagcaaggcaggcacataaagactctggtgagtgttcccagtcacagctatgtc 344
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 caagcaaggcaggcacataaagactctggtgagtgttcccagtcacagctatgtc 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 743
Length adjustment: 9
Effective length of query: 335
Effective length of database: 734
Effective search space: 245890
Effective search space used: 245890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_i18.g1 MSMg01no315_i18.g1 CHROMAT_FILE:
MSMg01no315_i18.g1 PHD_FILE: MSMg01no315_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:03 2005
(173 letters)
>mm_chr1_74844491_74845063
Length = 573
Score = 308 bits (159), Expect = 2e-88
Identities = 165/169 (97%), Gaps = 4/169 (2%)
Strand = Plus / Plus
Query: 9 gaattctattggagcccatatccctcagcagaaagttgctggtccagggttggaagaacc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattctattggagcccatatccctcagcagaaagttgctggtccagggttggaagaacc 268
Query: 69 aggtggggtctcagctccataacccttgtgactttggggttttccagtttg----gtgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 269 aggtggggtctcagctccataacccttgtgactttggggttttccagtttgtagtgtgtg 328
Query: 125 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtct 173
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtct 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
