Query= MSMg01no316_b05.b1 MSMg01no316_b05.b1 CHROMAT_FILE:
MSMg01no316_b05.b1 PHD_FILE: MSMg01no316_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:44 2005
(172 letters)
>mm_chr1_174388067_174388637
Length = 571
Score = 281 bits (145), Expect = 2e-80
Identities = 163/173 (94%), Gaps = 9/173 (5%)
Strand = Plus / Minus
Query: 4 ggaattcccattattacc----tgaaggcacataaggaaagggtgggagcagaggagaat 59
||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ggaattcccatta----caagatgaaggcacataaggaaagggtgggagcagaggagaat 316
Query: 60 tcttggaatctgggaaatcgtgtcaaggctgaaaaggcggggctgtggggttgggggatg 119
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcttggaatctgggaaat-gtgtcaaggctgaaaaggcggggctgtggggttgggggatg 257
Query: 120 gtattggggagtctggagaggtggtgaccattgacattcacactatgccggaa 172
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 256 gtattggggagtctggagaggtggtgaccagtgacattcacactatgccggaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 571
Length adjustment: 8
Effective length of query: 164
Effective length of database: 563
Effective search space: 92332
Effective search space used: 92332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no316_b05.g1 MSMg01no316_b05.g1 CHROMAT_FILE:
MSMg01no316_b05.g1 PHD_FILE: MSMg01no316_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:44 2005
(651 letters)
>mm_chr1_174217615_174218665
Length = 1051
Score = 1239 bits (641), Expect = 0.0
Identities = 650/655 (99%), Gaps = 5/655 (0%)
Strand = Plus / Plus
Query: 1 aggacctctggaagagcagtcagtgctcttaaccactgagccatcgcttcagccccctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggacctctggaagagcagtcagtgctcttaaccactgagccatcgcttcagccccctca 260
Query: 61 tcatattttctaaggagataaaaccatcacaaagtgcataagctgaagactcagatccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatattttctaaggagataaaaccatcacaaagtgcataagctgaagactcagatccta 320
Query: 121 gaggccacttttagtacacagggcttcccctccctgaataaaccaccaatcttagattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggccacttttagtacacagggcttcccctccctgaataaaccaccaatcttagattta 380
Query: 181 atacaatagcaaattattttcttttacatttgggcctgagaagacatctggcaagtacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacaatagcaaattattttcttttacatttgggcctgagaagacatctggcaagtacta 440
Query: 241 cagaagttcaaattgaagaggttcaataaatgaaataaaaattgatcgcgacatttcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagaagttcaaattgaagaggttcaataaatgaaataaaaattgatcgcgacatttcagc 500
Query: 301 aaatcaatcttatagtagatatttttcaaaagcctatgataaactggagtaaattactta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatcaatcttatagtagatatttttcaaaagcctatgataaactggagtaaattactta 560
Query: 361 ttggtttttgttggctggttggtttagtcttaagattttcttgagccagcaagatggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttggtttttgttggctggttggtttagtcttaagattttcttgagccagcaagatggttc 620
Query: 421 agtgtgtaagggctcctacctgccaatcctgttgacctgagttggattcctagaacccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgtgtaagggctcctacctgccaatcctgttgacctgagttggattcctagaacccac 680
Query: 481 gtggtagacagagaagcaaggtctgcaggtcctcc---acatgtgcactgtggtatgagt 537
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 gtggtagacagagaagcaaggtctgcaggtcctcctccacatgtgcactgtggtatgagt 740
Query: 538 gtgctcacttacacacacacacacacacac--gcgcacacacacattcacacacagacaa 595
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 gtgctcacttacacacacacacacacacacacgcgcacacacacattcacacacagacaa 800
Query: 596 ttatgaaatattttttaattaaaaaaacaagatcttctcaatgtagaataaaata 650
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttatgaaatattttttaattaaaaaaacaagatcttctcaatgtagaataaaata 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
