Query= MSMg01no317_e03.b1 MSMg01no317_e03.b1 CHROMAT_FILE:
MSMg01no317_e03.b1 PHD_FILE: MSMg01no317_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:14 2005
(321 letters)
>mm_chr1_164039522_164040242
Length = 721
Score = 598 bits (309), Expect = e-175
Identities = 315/317 (99%)
Strand = Plus / Minus
Query: 4 ggaattctatagagcctatctcccctgggatgagatatccctctctccaaagtcaatatt 63
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattctatagagcccatttcccctgggatgagatatccctctctccaaagtcaatatt 461
Query: 64 cctaattaaaaaaaaattacaggtgctaagtcctgatcacggattatggtttccagcaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cctaattaaaaaaaaattacaggtgctaagtcctgatcacggattatggtttccagcaga 401
Query: 124 cctcacagtgttgagttgcttaccagccactctcccacaagccacaagcatacccatgat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cctcacagtgttgagttgcttaccagccactctcccacaagccacaagcatacccatgat 341
Query: 184 tcaccaagcccttttccacaggaacactcctcctgcactctgccctcagcatcagttggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcaccaagcccttttccacaggaacactcctcctgcactctgccctcagcatcagttggg 281
Query: 244 agccacagcgtatgacttgttacataagtctgcagtccaagcctgtgtccccactgcaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agccacagcgtatgacttgttacataagtctgcagtccaagcctgtgtccccactgcaca 221
Query: 304 cggtcttcccgcctgtc 320
|||||||||||||||||
Sbjct: 220 cggtcttcccgcctgtc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_e03.g1 MSMg01no317_e03.g1 CHROMAT_FILE:
MSMg01no317_e03.g1 PHD_FILE: MSMg01no317_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:15 2005
(348 letters)
>mm_chr1_163846211_163846962
Length = 752
Score = 627 bits (324), Expect = 0.0
Identities = 339/348 (97%), Gaps = 8/348 (2%)
Strand = Plus / Plus
Query: 4 agaccaaaagggaagagagctgggagaaggcc------tagagccgcaccagcacattcc 57
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 204 agaccaaaagggaagagagctgggagaaggcccagccctagag--gcaccagcacattcc 261
Query: 58 tgcgtgattgacacttgctgctggcctttgtgtttccatctgagctagagagccaccagt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgcgtgattgacacttgctgctggcctttgtgtttccatctgagctagagagccaccagt 321
Query: 118 agagccttggcacatttgaagctgttttggttggttggtttgttttgttttgtttttcta 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agagccttggcacatttgaagctgttttggttggttggtttgttttgttttgtttttcta 381
Query: 178 tagagcaggacagagggctaacagtaaacatcccttaaactaattgatatttagtcacca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tagagcaggacagagggctaacagtaaacatcccttaaactaattgatatttagtcacca 441
Query: 238 acagtaaattgagtgaaaagctgatgattcaaccttcagagcattctacgtaaaaagtaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acagtaaattgagtgaaaagctgatgattcaaccttcagagcattctacgtaaaaagtaa 501
Query: 298 aatattctgatataaagaccattattcagttccaaccacgtattctcc 345
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 aatattctgatataaagaccattattcagttccaaccatgtattctcc 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 752
Length adjustment: 9
Effective length of query: 339
Effective length of database: 743
Effective search space: 251877
Effective search space used: 251877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
