AAAACAGGGAGCAAGGNNNCGGTTCCTACNGNNGNNNGNNNNNTTCCGGA
CCGCNGGGNNGGGNGGNNNNNGGGGGGGGNNGGTTTTCCCAGAAAGGGGG
NGGGGGGNNGGGGGGGGGGGNNNGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGNGGGGGGGNGGGGGGGGGGGGGGGGGGGGTTTTTTGGGGGGGG
GGGGGGGGGGGGGGGGNNGNGGNNNNNGNNGNNNAAAAATGGTGGGTGTA
AAGAAGAAAGAGAAGGAGAGGGTTTTTTCCCACACCCCCCAGGGAGAAAG
AAGGGGGTGGGGGGGGGCCCCCGGAAAAAAAAAAAAAAANGGGGGGGGGG
GGAGGCGAAAGGGCGACAGGGGAGAGAGACGAAGAAGAAAAAGAAAGAGA
GGGCGAGCGAAAAAAAAGAGAAAAACAGAGCCATAGAAAGCGAGAGGAAG
AAAACGAGGAGAAGGCGGGAGCCGAAGCAAGAACAGAAAGAGAGGAGGGG
CAGAAAGAAAGAAAAGACAGACGGCGATTTTTTTTTTTTTTTTTAGAGAA
GGGCAAGGGAAAAGAAGGGGAAGGAGAGGGGAGGGGGGGGGAGGGGAGGG
GGT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCAGAAATATCCATGTCCAGAGCAGATTGGCTGCCTCTAA
AGTGTGGTTGGAGGTGGCAGCCAGAGCTTGCCATTGAGTATCCGTTAAGC
CGCAGAGAGGCCCTCCCCCTCCCCCAACCCAAGGACATGGCAAATGGAAT
GATCTCTGATTTGACAAAGAGTAAGTGATTTCCCAGTCCTCAGAAGCATG
GCTCCTTTTCTTCTGAATGACAGCTCCTGACAGAGAGATGCTCAGCTCTC
AGCACTGCTTGATGATGGCTGAGACAAATGGCTTGTCTGTAAACATTTCT
AAGTTAATTATACTATTTGACTTCATTCTGAATATTTAATAGAATTTGTG
TAGTGATTAGATTCCCCCACAACTTTATTTTTGTGTTTCATGCTGTAAAC
AAAATTAAAGAGCAAATGACAAAGTATCTAACATACCTAATTAGGTATAA
ATAAACATATTTAATTAGAAGAACACTTACAAACCAGTAACAATAGAAAT
ATGTAGAAACTTTGTATATCAATCAAGAGTAAGTTTTCCCACATGTGATG
TATGAAATTTTCAGGAAATAAATTTTAAAAGTAATGTATCTTTCAAAAAG
CAATCCAATTATGGCTTANCATGCAAACTTTTACTTGGAGATTTAGACAG
CAATTATCTGGGGAAATGGTTTTGCCA

Query= MSMg01no319_f19.g1 MSMg01no319_f19.g1 CHROMAT_FILE:
MSMg01no319_f19.g1 PHD_FILE: MSMg01no319_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:41 2005
         (655 letters)



>mm_chr1_55758856_55759910
          Length = 1055

 Score = 1201 bits (621), Expect = 0.0
 Identities = 646/660 (97%), Gaps = 10/660 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccagagcagattggctgcctctaaagtgtggttggaggtggcagccagagcttgcc 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 atgtccagagcagattggctgcctctaaagcgtggttggaggtggcagccagagcttgcc 260

                                                                       
Query: 61  attgagtatccgttaagccgcagagaggccctccccctcccccaacccaaggacatggca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgagtatccgttaagccgcagagaggccctccccctcccccaacccaaggacatggca 320

                                                                       
Query: 121 aatggaatgatctctgatttgacaaagagtaagtgatttcccagtcctcagaagcatggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatggaatgatctctgatttgacaaagagtaagtgatttcccagtcctcagaagcatggc 380

                                                                       
Query: 181 tccttttcttctgaatgacagctcctgacagagagatgctcagctctcagcactgcttga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccttttcttctgaatgacagctcctgacagagagatgctcagctctcagcactgcttga 440

                                                                       
Query: 241 tgatggctgagacaaatggcttgtctgtaaacatttctaagttaattatactatttgact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatggctgagacaaatggcttgtctgtaaacatttctaagttaattatactatttgact 500

                                                                       
Query: 301 tcattctgaatatttaatagaatttgtgtagtgattagattccccc-----acaacttta 355
           |||||||||||||||||||||||||||||||||||||||||          | |||||||
Sbjct: 501 tcattctgaatatttaatagaatttgtgtagtgattagatt-----tggggataacttta 555

                                                                       
Query: 356 tttttgtgtttcatgctgtaaacaaaattaaagagcaaatgacaaagtatctaacatacc 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 556 tttttgtgtttcatgctgtaaacaaaattaaagagcaaatgacaaagtatctaacgtacc 615

                                                                       
Query: 416 taattaggtataaataaacatatttaattagaagaacacttacaaaccagtaacaataga 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 taattaggtataaataaacatatttaattagaagaacacttacaaaccagtaacaataga 675

                                                                       
Query: 476 aatatgtagaaactttgtatatcaatcaagagtaagttttcccacatgtgatgtatgaaa 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aatatgtagaaactttgtatatcaatcaagagtaagttttcccacatgtgatgtatgaaa 735

                                                                       
Query: 536 ttttcaggaaataaattttaaaagtaatgtatctttcaaaaagcaatccaattatggctt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttttcaggaaataaattttaaaagtaatgtatctttcaaaaagcaatccaattatggctt 795

                                                                       
Query: 596 ancatgcaaacttttacttggagatttagacagcaattatctggggaaatggttttgcca 655
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aacatgcaaacttttacttggagatttagacagcaattatctggggaaatggttttgcca 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space:   674025
Effective search space used:   674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)