TGCGGACGCTCAAGGAGAANNCNNTTTCCCGCACCGCNNAANNANNGGGG
ANTTTCCNNCCACCCGCAGNCNGNACANCNGNGCACNACAGGCAAGAGGA
GAGGCCATTTTTGCCCNNGAANNAGAANAANNNNNNGGAANNGAGNNAAA
GAGAGNNGNGAANNGNNNNGNNGNNGNNGGNAANNAAAANNGGGNNANAA
ANAAGGANAAGGGNNNNNAGNGNNGAGNNGNNNNNNNAGAAANTTTTTTT
TATTTTANTTGATTGAATTGTTTAATTTTGAGTTTNTGTTTGGTTAATTT
TGAAAGNNTTATTTATTTGTTTTNGGANANNNNNANGANNNNAAGNGANN
NAAATTTTTTGCTCCCCCCCTTCCTCACTGGANCAAAGTTCTTAGCTGGC
TCCTGGAATGCCCCCTTTAAATTTATTTTAACTCATTATCTGAGTCGTCC
ATAAGTCATCACTCCTCATTTAAAGAGGGATTCTGAAATCTCTTTCTAGA
GTTTATCTTTGGCTTCAAATATTAACAAATCATGNNTCTGTATAATTTTA
ATGCGAACTTCTGCCTTGCATATTCTTGATAATTGATGAGATATTTTCTT
TTTTTTGAATCTGTTGGGATAAATATGGTCTACACAACAAAAAACCCCTT
TTTTTTTTTTTTTTTGAAACAAGGGAAACAATTTTGGTCAACGGACTTTA
GACGGAACCAATGGCTGTGACTGGTAGTGGTGGGTG

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTGGATTTAAGCATTGCATGGACTATTGTATATA
ATGGGATATGAGGATATGCCATTAGAAATATCAGTAGGAATTTTTAAAAA
TTTGAGCTTTTTGTTATGCAGGATTATGTCATTAAATCAGCACAGTCCAA
ACTGAAGCAAGAAAACCATATCTCTCAAATTCTATAAAAGGGTATCTTAC
TTCTATTAGGGTTTGGATTGCATCCAAACCTCTTTCTAGAAATTTAATGA
TTAATGGCACCATTAGACATATATCATTACTTTAAGCTTTCAAATTTGGA
CAGCTTTTGACTTATGCTCTCCTAGCATAATCTTGAACTTGGGAGGGAGG
TGATGAGAACCAGCACCCCCATAAATAATAAATAAGTTTTAAATCATGAA
AGTTTAAATATGAAACACTAGCATCAAAGCAGAACAAACATACTTCATTA
TTGTTATGGAAAGTTAATGTGATATTTTCATTAGGTTTTGATAATCTCAT
GTAGTATATTTTAATGAAGTTCATTTCCATTGTCTACCAACCCATCTTCT
TGTTATCTTTTAAAGAAAAGCAAGTCCAATTTCGTGTTATTTAAACACTT
GTAGGTGTATTCACACCCTTTAGAAAACTGAAACTCATACTTCTAGCAGC
TATGAATTGCCAAGAACTCTCCTCGCTAGGTGTTGTATTTATT

Query= MSMg01no319_k23.g1 MSMg01no319_k23.g1 CHROMAT_FILE:
MSMg01no319_k23.g1 PHD_FILE: MSMg01no319_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:04 2005
         (591 letters)



>mm_chr1_31684907_31685897
          Length = 991

 Score = 1073 bits (555), Expect = 0.0
 Identities = 582/591 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttggatttaagcattgcatggactattgtatataatgggatatgaggatatgccattaga 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 791 ttggatttaagcattgcatggactattgtatataatgggatatgaggatatgacattaga 732

                                                                       
Query: 61  aatatcagtaggaatttttaaaaatttgagctttttgttatgcaggattatgtcattaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aatatcagtaggaatttttaaaaatttgagctttttgttatgcaggattatgtcattaaa 672

                                                                       
Query: 121 tcagcacagtccaaactgaagcaagaaaaccatatctctcaaattctataaaagggtatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tcagcacagtccaaactgaagcaagaaaaccatatctctcaaattctataaaagggtatc 612

                                                                       
Query: 181 ttacttctattagggtttggattgcatccaaacctctttctagaaatttaatgattaatg 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttacttctattagggtgtggattgcatccaaacctctttctagaaatttaatgattaatg 552

                                                                       
Query: 241 gcaccattagacatatatcattactttaagctttcaaatttggacagcttttgacttatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gcaccattagacatatatcattactttaagctttcaaatttggacagcttttgacttatg 492

                                                                       
Query: 301 ctctcctagcataatcttgaacttgggagggaggtgatgagaaccagcacccccataaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||| |   | ||||||
Sbjct: 491 ctctcctagcataatcttgaacttgggagggaggtgatgagaaccagtaatgctataaat 432

                                                                       
Query: 361 aataaataagttttaaatcatgaaagtttaaatatgaaacactagcatcaaagcagaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 aataaataagttttaaatcatgaaagtttaaatatgaaacactagcatcaaagcaaaaca 372

                                                                       
Query: 421 aacatacttcattattgttatggaaagttaatgtgatattttcattaggttttgataatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aacatacttcattattgttatggaaagttaatgtgatattttcattaggttttgataatc 312

                                                                       
Query: 481 tcatgtagtatattttaatgaagttcatttccattgtctaccaacccatcttcttgttat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcatgtagtatattttaatgaagttcatttccattgtctaccaacccatcttcttgttat 252

                                                              
Query: 541 cttttaaagaaaagcaagtccaatttcgtgttatttaaacacttgtaggtg 591
           ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 251 cttttaaagaaaagcaagtccaatttcgtgtcatttaaacacttgtaggtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)