Query= MSMg01no320_n09.b1 MSMg01no320_n09.b1 CHROMAT_FILE:
MSMg01no320_n09.b1 PHD_FILE: MSMg01no320_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:26 2005
(335 letters)
>mm_chr1_70758090_70758824
Length = 735
Score = 559 bits (289), Expect = e-164
Identities = 323/335 (96%), Gaps = 2/335 (0%)
Strand = Plus / Plus
Query: 1 gaaggacgcatgctccactatgttcatagcagccttatttataatatcattgctttcttt 60
||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 201 gaaggacacatgctccactatgttcatagcatccttatttataatagcattgctttcttt 260
Query: 61 taaacatacttgcatatttaatatcttcagatagcaacatttgtctctatgagttaacag 120
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tacacatacttgcatatttaatatcttcagatagcaacatttttctctatgagttaacag 320
Query: 121 aattactcaaatggactgtcaacatgcctaattccagagcattctacatatctctgatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattactcaaatggactgtcaacatgcctaattccagagcattctacatatctctgatga 380
Query: 181 tagtgaaacatataagttctacatataaaaatgaccataggatagtaacaatattaatat 240
||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 381 tagtgaaacatgtaagttctacatataaaaatgaccacaggacagtaacaatattaatat 440
Query: 241 tattatatgattaatattttgaaaaaatttgaaagatattcttaaaatatagccctagcc 300
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 tattat--gattaatattttgaaaaagtttgaaagatattcttaaaatatagccctagcc 498
Query: 301 agcctacaacttactatgcagaccagcctggcctt 335
|||||||||||||||||||||||||| ||||||||
Sbjct: 499 agcctacaacttactatgcagaccaggctggcctt 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_n09.g1 MSMg01no320_n09.g1 CHROMAT_FILE:
MSMg01no320_n09.g1 PHD_FILE: MSMg01no320_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:26 2005
(281 letters)
>mm_chr1_70941866_70942546
Length = 681
Score = 520 bits (269), Expect = e-152
Identities = 278/281 (98%)
Strand = Plus / Minus
Query: 1 ttaatgacatgctctccgtgtcaaccataggttagaaacaggcaccgagtacaaccatta 60
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 ttaatgacatgctctccatgtcaaccataggttagaaacaggcagtgagtacaaccatta 422
Query: 61 tgttaacaattcctgatggagacacatcaaagcaaaatgtgaaaattttaagatagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttaacaattcctgatggagacacatcaaagcaaaatgtgaaaattttaagatagagaa 362
Query: 121 caccagtttatgggaaccagttaaaatcccaggattgtatgatttattgctgtcatacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caccagtttatgggaaccagttaaaatcccaggattgtatgatttattgctgtcatacat 302
Query: 181 aataataagtgctataaatatgcttgatgtattagacatgtaaatttatgtgtagattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aataataagtgctataaatatgcttgatgtattagacatgtaaatttatgtgtagattat 242
Query: 241 tactaataactaatgactgtcagatcaagtcattcacagtc 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactaataactaatgactgtcagatcaagtcattcacagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|