Query= MSMg01no322_p08.b1 MSMg01no322_p08.b1 CHROMAT_FILE:
MSMg01no322_p08.b1 PHD_FILE: MSMg01no322_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:02 2005
(292 letters)
>mm_chr1_190295007_190295697
Length = 691
Score = 489 bits (253), Expect = e-143
Identities = 279/291 (95%), Gaps = 7/291 (2%)
Strand = Plus / Plus
Query: 1 cccgttgatatatgtttggctatgtgttatatctgggattaattatatcccc---aattt 57
||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 201 cccgttgatatatgtttggctatgtgttatatctgggataaattatat----gaaaattt 256
Query: 58 ctatactaaaatatgacttttgattttcctactgatgttagctttgtgtctttgtgaata 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ctatactaaaatatgacttttgattttcctactgatgttagctttgtgtctttgtgaata 316
Query: 118 tgaaagctaaatgtatctaatgaatcttgaagatcatatgagtctagtggatcttataaa 177
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 317 tgaaagctaaatggatctaatgaatcttgaagatcatatgagcctagtggatcttataaa 376
Query: 178 agctaagtggatttaatactggggagactactgagaataaggtcatccattccacatcaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agctaagtggatttaatactggggagactactgagaataaggtcatccattccacatcaa 436
Query: 238 tgaaattgatgtctgtatcagatgttaatattctaagttcttcaaaatcca 288
||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 437 tgaaattgaggtctgtatgagatgttaatattctaagttcttcaaaatcca 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_p08.g1 MSMg01no322_p08.g1 CHROMAT_FILE:
MSMg01no322_p08.g1 PHD_FILE: MSMg01no322_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:02 2005
(242 letters)
>mm_chr1_190414238_190414879
Length = 642
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Minus
Query: 1 acttcggggctggggaacttggagtcagggagggcacactagcccctttagatgagcagg 60
||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||
Sbjct: 442 acttcggggctggggaacttggagtcagggagggcgcactagctcatttagatgagcagg 383
Query: 61 ggtaggatgttaggaaaggtaaattatgtgtgagaaaataacctcccatacacaagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggtaggatgttaggaaaggtaaattatgtgtgagaaaataacctcccatacacaagagac 323
Query: 121 attgggccttacagagtcagtgagtagaagaatgttctggaaagaaagatgaatggtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 attgggccttacagagtcagtgagtagaagaatgttctggaaagaaagatgaatggtggg 263
Query: 181 cagaaagcagaggctctgcagactatacccacggtttctgaactgtagtatctctcaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagaaagcagaggctctgcagactatacccacggtttctgaactgtagtatctctcaagc 203
Query: 241 tc 242
||
Sbjct: 202 tc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
