NNATTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCG
CGGAATTCTCCTCATACCCCTCCTACCTCTCTCTCTTCCTCTTTTTCTCT
TCCTCCTCCCTCTTCTCTCCCTCCTCCTTCTTCCTACCTCTCCTGCCTCC
TTCCTCTCTCTTTCTCCTTGCTTCCCCCACTTGAAAATGTTTAACTAATA
GTTCATAATAAATCTGAAAAAGGGAATTCTCCTCATACCCTTCCTACCTC
TCTCTCTTCCTCTTTTTCTCTTCCTCCTCCCTCTTCTCTCCCTCCTCCTT
CTTCCTCCTCTCCTGCCTCCTTCCTCTCTCTTTCTCCTTGCCGTTATCTT
TTGAGCCACAAAACAGCCAACTAACTGGCTTACAGCAGGGCAGCATTGAA
GGTTCCCCATTCTGTGCAAACACCTTTGGAGCGAATCCTGTGGTGGGGAA
GAGAGAGCAATTAGCTTCCTGAAGTCTCAGCCGGGTCTGTTAATGAACGC
TGCTGGCACTGTAATTTACAGATGGGATTATGACATTCCCACCTCTACTC
AGGTCCTGCTTCCTCAACTCTCAGAGGTGAGGAGATGATGAATGAGTTAA
TATTTGTTCAAGGATTTGCAGAAAAGTAGCGTCTTAAAAGCTGCCGCANA
TGGCGCTTCTACGCAGTTCCCTCTAAGTGAGAGCAAGAGAAGGAGACTGG
AGCAGGACACC

NNNNCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGA
ATGGCAGAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGA
AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAA
AGAGGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACT
CTGGAAATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGG
AGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACT
GGTAAGAAGGACACATGCTCCACTACGTTCATAGCAGCCTTATTTATAAT
AGCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATAC
AGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAG
AATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCAT
CCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTACTCAC
TGATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATAT
AATTTGCTAAACACATG

Query= MSMg01no324_c11.b1 MSMg01no324_c11.b1 CHROMAT_FILE:
MSMg01no324_c11.b1 PHD_FILE: MSMg01no324_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:23 2005
         (666 letters)



>mm_chr1_71984222_71985287
          Length = 1066

 Score =  994 bits (514), Expect = 0.0
 Identities = 534/541 (98%)
 Strand = Plus / Minus

                                                                        
Query: 126  cttcccccacttgaaaatgtttaactaatagttcataataaatctgaaaaagggaattct 185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 cttcccccacttgaaaatgtttaactaatagttcataataaatctgaaaaagggaattct 976

                                                                        
Query: 186  cctcatacccttcctacctctctctcttcctctttttctcttcctcctccctcttctctc 245
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  cctcatacccctcctacctctctctcttcctctttttctcttcctcctccctcttctctc 916

                                                                        
Query: 246  cctcctccttcttcctcctctcctgcctccttcctctctctttctccttgccgttatctt 305
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915  cctcctccttcctcctcctctcctgcctccttcctctctctttctccttgccgttatctt 856

                                                                        
Query: 306  ttgagccacaaaacagccaactaactggcttacagcagggcagcattgaaggttccccat 365
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855  ttgagccacaaaacggccaactaactggcttacagcagggcagcattgaaggttccccat 796

                                                                        
Query: 366  tctgtgcaaacacctttggagcgaatcctgtggtggggaagagagagcaattagcttcct 425
            |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 795  tctgtgcaaacacctttggagcgaatcctgtggcagggaagagagagcaattagcttcct 736

                                                                        
Query: 426  gaagtctcagccgggtctgttaatgaacgctgctggcactgtaatttacagatgggatta 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735  gaagtctcagccgggtctgttaatgaacgctgctggcactgtaatttacagatgggatta 676

                                                                        
Query: 486  tgacattcccacctctactcaggtcctgcttcctcaactctcagaggtgaggagatgatg 545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675  tgacattcccacctctactcaggtcctgcttcctcaactctcagaggtgaggagatgatg 616

                                                                        
Query: 546  aatgagttaatatttgttcaaggatttgcagaaaagtagcgtcttaaaagctgccgcana 605
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 615  aatgagttaatatttgttcaaggatttgcagaaaagcagcgtcttaaaagctgccgcaaa 556

                                                                        
Query: 606  tggcgcttctacgcagttccctctaagtgagagcaagagaaggagactggagcaggacac 665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555  tggcgcttctacgcagttccctctaagtgagagcaagagaaggagactggagcaggacac 496

             
Query: 666  c 666
            |
Sbjct: 495  c 495


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)