CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT
CCACTTAGATTTGACCTTACTACAAGGAGATAAGTATGGATCGATTCGCA
TTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGT
CTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCT
CTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTTTA
TCCTTGAGAAGACTTTTG

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAATCCTAAAGCTGACTACCA
CTTACTGCAAAGTTTTGAAAGAAAAGGAAAAAAAAAGCTACTTGTATAAA
AATATGCAACAATAAATTGCTTGGTCTGTATTGGTAGCAAATGAATGCTA
GTATCTTTGGAAATTGAATTGTACTCTGCAACATATTTGCATGTGAGCAT
TTTCTGCTTTGAAACTATACACGCTGCACGCGTATTCATTGTCAGACTGC
TTTATGGTTTTGCTTTTAAAATGATTTCACTTTTGCATAAATGGAACATT
TAGCCTGGGAGGAGATTACATTTGTTGTCCTCTGTAATTGTTGCTTCGTT
TTGACTGTCTTCGCTGTTTTCCTTGTTTACCTCTTTCAGGAGCACAGGCA
AAGCACAAAGCAGTTTCCTGCTCATTCATCAAAAATTGCTCAGGCTCCTG
GCTCCCCCTGCCCCTTTAAGGAAGCATGTAAAAATACACCAATAATAATT
TTAAAAAAGTATAGGATAAAAATATACCATAACACAAACTACCATGGTGA
TCTAAAGTATGCTCTCCTTCTCTCTTCCCGTTTCTAATTTTTAAAAATGA
CAGTTATTTACCTTTGCTAAGACAGAGCTCTTCTAAGAGAGCAGCAGGAA
TCACAAACTTCCCTCTTCTGTGTC

Query= MSMg01no325_g12.g1 MSMg01no325_g12.g1 CHROMAT_FILE:
MSMg01no325_g12.g1 PHD_FILE: MSMg01no325_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:55 2005
         (644 letters)



>mm_chr1_69870199_69871243
          Length = 1045

 Score = 1168 bits (604), Expect = 0.0
 Identities = 634/644 (98%), Gaps = 1/644 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaatcctaaagctgactaccacttactgcaaagttttgaaagaaaagg-aaaaaaaaa 59
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agaaatcctaaagctgactaccacttactgcaaagttttgaaagaaaaggaaaaaaaaaa 260

                                                                       
Query: 60  gctacttgtataaaaatatgcaacaataaattgcttggtctgtattggtagcaaatgaat 119
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 gctacttgtataaaaatatgcaacaataaatggcttggtctgtattggtagcaaatgaat 320

                                                                       
Query: 120 gctagtatctttggaaattgaattgtactctgcaacatatttgcatgtgagcattttctg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctagtatctttggaaattgaattgtactctgcaacatatttgcatgtgagcattttctg 380

                                                                       
Query: 180 ctttgaaactatacacgctgcacgcgtattcattgtcagactgctttatggttttgcttt 239
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttgaaactatacacgctgcacgtgtattcattgtcagactgctttatggttttgcttt 440

                                                                       
Query: 240 taaaatgatttcacttttgcataaatggaacatttagcctgggaggagattacatttgtt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaatgatttcacttttgcataaatggaacatttagcctgggaggagattacatttgtt 500

                                                                       
Query: 300 gtcctctgtaattgttgcttcgttttgactgtcttcgctgttttccttgtttacctcttt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcctctgtaattgttgcttcgttttgactgtcttcgctgttttccttgtttacctcttt 560

                                                                       
Query: 360 caggagcacaggcaaagcacaaagcagtttcctgctcattcatcaaaaattgctcaggct 419
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 caggagcacaggcaaagcacaaagcagtttcctgctcattcatcaaaaatcgctcaggct 620

                                                                       
Query: 420 cctggctccccctgcccctttaaggaagcatgtaaaaatacaccaataataattttaaaa 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 cctggctccccctgcccctttaaggaagcatgtaaaaatacaccaataataatttttaaa 680

                                                                       
Query: 480 aagtataggataaaaatataccataacacaaactaccatggtgatctaaagtatgctctc 539
           |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 681 aagtataggataaaaatataccataacacaaactaccatggtgatctaaagtgtgttctc 740

                                                                       
Query: 540 cttctctcttcccgtttctaatttttaaaaatgacagttatttacctttgctaagacaga 599
           | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 741 cctctctcttcccgtttctaatttttaaaaatgacatttatttacctttgctaagacaga 800

                                                       
Query: 600 gctcttctaagagagcagcaggaatcacaaacttccctcttctg 643
           |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 801 gctcttctaagagagcagcaggtatcacaaacttccctcttctg 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space:   656190
Effective search space used:   656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)